Entry information : PpaPrx32 (PP00178G00270)
Entry ID 3443
Creation 2008-08-05 (Christophe Dunand)
Last sequence changes 2011-01-26 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: PpaPrx32 (PP00178G00270)
Name (synonym) PpaPrx32 (PP00178G00270)
Class Class III peroxidase    [Orthogroup: Prx339]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrx32
start..stop
S start..stop
PpaPrx23 560 0 5..335 8..338
PpaPrx41 303 3.2e-101 38..343 63..364
PpaPrx15 302 7.09e-101 37..343 71..374
PpaPrx37 291 3.26e-97 43..343 40..337
Gene structure Fichier Exons


exon

Literature and cross-references PpaPrx32 (PP00178G00270)
Literature Quatrano,R.,Bashiardes,S., Cove,D., Cuming,A., Knight,C., Clifton ,S., Marra,M., Hillier,L., Pape,D., Martin,J., Wylie,T., Underwood ,K., Theising,B., Allen,M., Bowers,Y., Person,B., Swaller,T., Steptoe,M., Gibbons,M., Harvey,N., Ritter,E., Jackson,Y., McCann,R., Waterston,R. and Wilson,R. Leeds/Wash U Moss EST Project.
DNA ref. Phytozome 12:   scaffold_178 (282892..281638)
Cluster/Prediction ref. UniGene:   Ppa.16962 [3' end]
Protein sequence: PpaPrx32 (PP00178G00270)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   344 (322)
PWM (Da):   %s   37292.09 (35006.9)  
PI (pH):   %s   5.37 (5.71) Peptide Signal:   %s   cut: 23 range:23-344
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSILQTLALLLCLAVSFQPGDARCPLAILGRRSLKQADLPPQPPL
QFGFYDISCPSLNAIIDERMRFWVLQDIRTPAKILRLFFHDCFAAGCEASILLNSTSTVLAEKDAPISQTLDKYD
VIENIKWTVETACPGIVSCADILALAAAKSVEL
AGGPILQTETGRRDGVVSYLAGATASMPLSIQKIDDLLAMFVQAGLDLTDLVILSGAHTIGEVHCTNFADRFDPAANSPFPDPSFGE
QLRAYCTRGGTGDMATLNLRTFIDLQSPNSFDISYFVNLIVGRGVMTSDQALFNDQRTQPLVRAFAGNRTLFFESFQASMLKMGRLHVLTGTSGVIRRQCGVRA

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 2 and 3) and 3 ESTs. Incorrect prediction from Phytozome (splicing error in 5').
DNA
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CDS
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