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Entry information : LsaPrx42
Entry ID 3480
Creation 2006-08-14 (Christophe Dunand)
Last sequence changes 2006-08-14 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-04-25 (Christophe Dunand)
Peroxidase information: LsaPrx42
Name LsaPrx42
Class Class III peroxidase     [Orthogroup: Prx024]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx42
start..stop		 S start..stop
HaPrx42 474 1.2e-170 1..287 1..287
HaPrx24 458 2.47e-164 1..287 1..286
HaPrx102 426 7.56e-152 1..287 3..286
LperPrx41 424 1.09e-151 1..279 3..284
Literature and cross-references LsaPrx42
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DW126158 [5' end]
Protein sequence: LsaPrx42
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   286 (318)
PWM (Da):   %s   30630.59 (35381.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.2 (4.81) Peptide Signal:   %s   cut: 20 range:20-337
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVNNKTVAFV VAIGFIFLNL SGHCYGALQF GFYNGKCRGS DVEDIVRKTV LSKFLVDRTI TPALLRMQFH DCFVNGCDAS ILLDGTNSEK TAPPNLSVRG YDVIDAVKTA VERVCPDVVS  CADIIVMATR DAVSLSGGGR YNVQTGRRDG RVSLAKDAQI LPSPSSSVSS AIQAFATKGL TATDMIYLLG GHTIGIAHCS FFQDRLYNFE NSGKPDPTMD LALLTSLRRT CPRNATVDGK 
ANLDQNSFSS AVVDKSFYTQ INVRRGVLQI *SELAVDGLS KSTVAAI 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (DW126158 and DY983684). Stop codon in the first accession and frame shift in the second. 3'end is missing. Cultivar="Salinas".