1. Browse the Database
  2. View Redoxidase
Entry information : LperPrx03
Entry ID 3506
Creation 2006-08-16 (Christophe Dunand)
Last sequence changes 2006-08-16 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LperPrx03
Name LperPrx03
Class Class III peroxidase     [Orthogroup: Prx027]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca perennis    [TaxId: 43195 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LperPrx03
start..stop		 S start..stop
HaPrx08 498 9.47e-179 8..376 8..316
LvPrx03 450 5.79e-160 3..366 1..305
CsPrx20 438 6.6e-155 1..376 1..316
IaquPrx45 437 1.7e-154 1..376 1..319
Literature and cross-references LperPrx03
Literature Kozik,A.,Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S.,Livingston,K, Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW093442 [5' end]
Protein sequence: LperPrx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   376 (351)
PWM (Da):   %s   40004.19 (37330.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   4.62 (4.46) Peptide Signal:   %s   cut: 26 range:26-376
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MELARRISVV YFLITVVVLA GTGKGQLVEN FYAGTCPMVE AIVRQTVVTK VGQTFTTIPA TLRLFFHDCF VEGCDASVMI ASPNGDAEKD AEDNLSLAGD GFDTVIKAKQ AVESVCPGVV  SCADVLAIAA RDVVAQAGGP LFNVELGRRD GLISQASRVT GNLPDPTFNL IQLNTIFARN SCADVLAIAA RDVVAQAGGP LFNVELGRRD GLISQASRVT GNLPDPTFNL IQLNTIFARN  NLTELDMIAL SGAHTLGFSH CNRFANRLYS FSPASTVDPS LSPTYAQQLM AACPQNVDPD IAIDMDPETP RTFDNVYYQN LVAGKGLFTS DEVLFTDASS QPTVNDFAKS PGDFNAAFCT 
AMRKLGRTGV KIGIQG 

Retrieve as FASTA  
Remarks Partial sequence from 7 ESTs: DW093442, DW096652, DW076132, DW090687, DW098591, DW076397, DW092506. Short 3'end is missing. Strain="PI-274378".