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Entry information : MtAPx01 (Medtr4g061140.1[4.0] / Medtr4g061140.1[3.5] )
Entry ID 3509
Creation 2006-08-16 (Christophe Dunand)
Last sequence changes 2006-08-16 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-07-30 (Christophe Dunand)
Peroxidase information: MtAPx01 (Medtr4g061140.1[4.0] / Medtr4g061140.1[3.5] )
Name (synonym) MtAPx01 (Medtr4g061140.1[4.0] / Medtr4g061140.1[3.5] )
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation Cytosolic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtAPx01
start..stop		 S start..stop
PsAPx01 491 3.73e-179 1..250 1..250
GmAPx01 486 1.87e-177 1..250 1..250
VuAPx01 485 7.62e-177 1..250 1..250
GmAPx26 477 1.05e-173 1..246 1..246
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 22583197..22583315 117 N° 2 22582730..22582904 173 N° 3 22582564..22582629 64 N° 4 22581910..22581958 47
N° 5 22581737..22581822 84 N° 6 22581378..22581457 78 N° 7 22581179..22581281 101 N° 8 22580999..22581057 57
N° 9 22580870..22580885 14  
complement(join(22580870..22580885,22580999..22581057,22581179..22581281,2258137 8..22581457,22581737..22581822,22581910..22581958,22582564..22582629,22582730..2 2582904,22583197..22583315))


exon

Literature and cross-references MtAPx01 (Medtr4g061140.1[4.0] / Medtr4g061140.1[3.5] )
Literature Shaull,S., Lin,S., Dixon,R., May,G., Sumner,L., Gonzales,B.,
Cook,D., Kim,D. and Roe,B.A. Direct Submission
DNA ref. Phytozome 12:   chr4 (22583315..22580870)
Cluster/Prediction ref. Phytozome Gene 12:   31111925 UniGene:   Mtr.6412
Protein sequence: MtAPx01 (Medtr4g061140.1[4.0] / Medtr4g061140.1[3.5] )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250 (238)
PWM (Da):   %s   27035.77 (25782.4)  
PI (pH):   %s   5.86 (8.67) Peptide Signal:   %s   cut: 21 range:21-258
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGKSYPTVSADYQKAVEKAKRKLRGFIAEKKCAPLMLRLAWHSAGTFDSKTKTGGPFGTIKHQAELAHGANNGLDIAVRLLEPLKEQFPIISYADFYLAGVVAVEVTGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALS
GGHTGAAHKERSGFEGPWTSNPLIFDNSYFTELLGGEKEGLLQLPSDKALLSDPVFRPLVEKYADEDAFFADYAEAHQKLSELGFAEA

Retrieve as FASTA  
Remarks Complete sequence from 435 ESTs and genomic (chromo 4, 8 introns). Also found in AC137668 and DQ122791 (fragment).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAAATCTTACCCAACCGTGAGTGCTGATTACCAGAAGGCTGTTGAGAAGGCGAAGAGGAAGCTCAGAGGTTTCATCGCTGAGAAGAAATGTGCTCCTCTTATGCTCCGTTTGGCG
TAAGTTTCATTTTCCGCTCATTTTTTGTAGGACCGTTTCTATGTGAGATTTTCACTTATTAGATTGTTTAGCTTAAATTTGTGCTTGATTATTTTTTTGTAATTATTCGTGTGATTTTTG
TCATGATTTGTGTAATTTTATTTTTGTTATGATTTGTTTTGACTTTTTTGTCACAATTTTTTTTTGTTTGATGATTTGTGATGAATTGTATGATTTTTTTTGTAATCAACTGAGTGTTTT
CTTTTTATGATGAATTGAGTGTGATTTTTTTGTTATGATTTGTTTGTGTAGATATGGCACTCTGCTGGAACTTTTGATTCAAAGACAAAGACTGGTGGTCCTTTCGGAACCATCAAGCAC
CAAGCCGAGCTTGCTCATGGTGCTAACAACGGTCTTGATATTGCTGTTAGGCTTTTGGAGCCTCTTAAGGAGCAATTCCCAATCATTAGCTATGCTGATTTCTACCAGGTAGTGATTTGT
TGTATTTTTTGTGATGAATTGCTAGATCTTGCTGTATTATTTCAGTCTACGATTTTTGTGCTTAATGGCTTGCTTTGTGGTTATGCAGTTTTGGCTGGTGTTGTTGCTGTTGAGGTTACA
GGTGGACCTGAAGTTCCTTTCCACCCAGGCAGGGAGGTATGTTTATGTTTAGTACTTTCAGTTTCTCTTTATTTATTTATATGGTATAGTTGTATTTTTTCAATACAAATTATGATACTT
CTTTAACTTTTTGGTCGTATTTTTTGTCTGCAAATCTTGTTGACATGATTTGAAAATCAATTACTGGTTATAACTTTTCTCGGTATATAATGATCGGAATTATGTCCGCGAATACTTTTT
TTGTAAAGTGTTTGATCAGTCTTTGTAACATGTATGGGAATTATTTGTAAGTTTTGACTGTCTGTTCGAAATGCGTTTGCAATTAATACGAAACAAATTTGTCTTGCATTTCACGTTCTC
AGATTTCATTTATTTGCATGTTATGTAAGCTGTCTGTAATCCTTATCAACGAGTTTCTGGGTTTCAAATATTTCTGTTGGTAACCAACTTGTAGATTGCATTGCAATAATTAACCACATG
TGATAACTGGGAATGCTTTTTGTCTCTTGCATGTTTTGTAATTATGTACACATATGGATGCTAAATTATACTCAAAAGATGCTGATGTATCTTTGTTTTTCACCCTATTTAATTTTTATA
TTTGGAGGCTAATTGGTCCTTTGTTCTGGTTTAATTATCAGGAGACAAGCCTGAGCCACCACCAGAGGGTCGCTTGCCTGATGCCACCAAGGGTAAGTGTTCTGGACTTGCGATGTGAAT
TATTGCCTACAATTGACTGGTAGTTGTTTGGCTCATTATTTGATTCTTGATTTTTGCAGGTGTTCTGACCATTTGAGGGATGTGTTTGGCAAAGCTATGGGGCTTAGTGACCAGGACATC
GTTGCTTTGTCTGGTGGCCACACCATTGTATGCATTGACTTTAATCTGTTTATTGAGTATAGTATTTGTCACATTTGATATTTTGACACTGGAATAAGCATCTAAGTTTTGTGGCTGCAT
TGTGGTTGTGCGATTTGTGATTGTGATGATATGGCTGCCAATGCAAAAAACTTGACTAAGTTGCCTTATTATCTGCAAAATTTTATTTTTAACTTGTTTAATTGTTATGAAAAATAATAA
CATATTCGACTATTCTCAACATTGAGGTTGTGACTGTGTTTTGGTTATGCTTAATGTAATTTTTAGGGGGAGCTGCACACAAGGAGCGTTCTGGATTTGAGGGCCCATGGACTTCTAATC
CTCTCATTTTTGACAACTCATACTTTACGTGAGTCTAATTAAAAACATTATCTCTCATCCATGCCCCCTTTTTTCTTTGTTTTAAATTCTTATTATTGATTATCGATGTTGTTGGAATGA
TTAGGGGGAGTTGTTGGGTGGTGAGAAGGAAGGCCTTCTTCAGTTGCCAAGTGATAAGGCACTTTTGAGCGACCCTGTATTCCGCCCACTTGTTGAGAAATATGCTGCTGTATGTATATT
TAATATTTAATATTCCTATAATAATCCTTTTCATCATATTGTTGGCATTATGAAATTATTATATCTGCTGATAAGTTAATCTAAGAATTCTCATTTGTCAATGATTGCAGGAGATGAAGA
TGCTTTCTTTGCTGATTATGCCGAAGCTCATCAGAAGCTATCTGAGCTTGGGTAAGTCATATAATATATCTTGTATTTATCTTCAAAGATTACGATTTTACACATCCTTTAAGTTCTGCA
TTATCCATTGGAAGTTGATTCATGTTATGTTTTTTACCTCATAGGTGTTCGCAGAAGCCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGAAAATCTTACCCAACCGTGAGTGCTGATTACCAGAAGGCTGTTGAGAAGGCGAAGAGGAAGCTCAGAGGTTTCATCGCTGAGAAGAAATGTGCTCCTCTTATGCTCCGTTTGGCA
TGGCACTCTGCTGGAACTTTTGATTCAAAGACAAAGACTGGTGGTCCTTTCGGAACCATCAAGCACCAAGCCGAGCTTGCTCATGGTGCTAACAACGGTCTTGATATTGCTGTTAGGCTT
TTGGAGCCTCTTAAGGAGCAATTCCCAATCATTAGCTATGCTGATTTCTACCAGTTGGCTGGTGTTGTTGCTGTTGAGGTTACAGGTGGACCTGAAGTTCCTTTCCACCCAGGCAGGGAG
GACAAGCCTGAGCCACCACCAGAGGGTCGCTTGCCTGATGCCACCAAGGGTTCTGACCATTTGAGGGATGTGTTTGGCAAAGCTATGGGGCTTAGTGACCAGGACATCGTTGCTTTGTCT
GGTGGCCACACCATTGGAGCTGCACACAAGGAGCGTTCTGGATTTGAGGGCCCATGGACTTCTAATCCTCTCATTTTTGACAACTCATACTTTACGGAGTTGTTGGGTGGTGAGAAGGAA
GGCCTTCTTCAGTTGCCAAGTGATAAGGCACTTTTGAGCGACCCTGTATTCCGCCCACTTGTTGAGAAATATGCTGCTGATGAAGATGCTTTCTTTGCTGATTATGCCGAAGCTCATCAG
AAGCTATCTGAGCTTGGGTTCGCAGAAGCCTAA

Retrieve as FASTA