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Entry information : LvPrx06
Entry ID 3515
Creation 2006-08-28 (Christophe Dunand)
Last sequence changes 2006-08-28 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LvPrx06
Name LvPrx06
Class Class III peroxidase     [Orthogroup: Prx019]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca virosa    [TaxId: 75947 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LvPrx06
start..stop		 S start..stop
LsaPrx06 605 0 1..302 1..302
LsPrx06 542 0 2..270 1..269
HaPrx80 538 0 10..302 38..330
CsPrx06 493 7.49e-178 6..302 4..300
Literature and cross-references LvPrx06
Literature Kozik,A.,et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW162258 [5' end]
Protein sequence: LvPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   302 (285)
PWM (Da):   %s   33067.49 (31265.5)  
PI (pH):   %s   5.05 (5.05) Peptide Signal:   %s   cut: 18 range:18-302
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MCLLSFVLCL LPVVISAAAP PLQPGYYAKS CPNAELIVRD VMKKAMLREP RSGASVMRLQ FHDCFVNGCD GSLLLDDTPT MLGEKLSLSN INSLRSYEVV DEIKEALESA CPHIVSCADI  IIMASRDAVA LSGGPDWEVK LGRKDSLTAS QKDSDDIMPS PRANASSLID LFARFDLSVK DLVSLSGSHS IGNGRCFSIV FRLYNQSGTG RPDPTIEPKF RKKLDKLCPL GGDGNVTGDL 
DFTPHVFDNQ YFKDLVNGRG FLNSDETLFT FPETRGYVRR YSEDESEFFR GFVDGMIKMG GL 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs: DW159791, DW162258 (Misplicing between FHDC and GCDASPS). 3'end is missing and frame shift in 3'. Strain="UK-1".