1. Browse the Database
  2. View Redoxidase
Entry information : LsPrx12-3
Entry ID 3538
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsPrx12-3
Name LsPrx12-3
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca saligna    [TaxId: 75948 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsPrx12-3
start..stop		 S start..stop
LsePrx13 548 0 1..275 1..275
LsaPrx13 501 0 1..275 1..275
LsPrx13-1 494 8.06e-180 1..275 1..275
LsPrx13-2 493 2.62e-179 1..275 1..275
Literature and cross-references LsPrx12-3
Literature Kozik a et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
mRNA ref. GenBank:   DW067761 [5' end]
Protein sequence: LsPrx12-3
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   275 (249)
PWM (Da):   %s   29247.78 (26351.2) Transmb domain:   %s   i11-33o
PI (pH):   %s   7.18 (5.79) Peptide Signal:   %s   cut: 27 range:27-275
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MESFSRKKTP LFFLVMLATL TTLALGQTRV GFYQTSCPRV ETIVQSAVAA ANRANPGVPP GLVRMFFHNC FVNGCDASVL ITGSGSERTA PPNSLLRGFE IIDAARTQLE TACPGVVSCA  DILAIAARDS VLLAGGIARW QVPLGRRDGL VSRAADTANL PAFNDPVDVQ IRKFSDKGLS TQDLVTLSGA HTLGTAACAL FSYRLYNFNN TNGPDPSIDT TFLPTLRNLC PNGGDGSTRV 
ALDNGSENRF DTSYFGNLRD GRGVLESDQV LWGNP 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 3'end is missing. 5'UTR (SSYLKTNT-IILL)