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Entry information : SHspCP01_PV-4
Entry ID 3562
Creation 2006-08-23 (Filippo Passardi)
Last sequence changes 2006-08-23 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-03-17 (Christophe Dunand)
Peroxidase information: SHspCP01_PV-4
Name SHspCP01_PV-4
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Shewanellaceae Shewanella
Organism Shewanella sp.    [TaxId: 50422 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SHspCP01_PV-4
start..stop		 S start..stop
SfrCP02_NCIMB400 1282 0 1..756 1..757
AmacCP01 1101 0 1..756 16..768
IlCP01 1001 0 50..756 39..747
SamCP01_SB2B 998 0 40..756 18..735
Literature and cross-references SHspCP01_PV-4
Literature Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T., Hammon,N., Israni,S., Pitluck,S. and Richardson,P. CONSRTM US DOE Joint Genome Institute (JGI-PGF). Complete sequence of Shewanella loihica PV-4.

Protein ref. UniProtKB:   A3QAT3
DNA ref. GenBank:   CP000606.1 (803961..806231)
Protein sequence: SHspCP01_PV-4
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   756 (730)
PWM (Da):   %s   82995.65 (80330.1) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.58 (6.26) Peptide Signal:   %s   cut: 27 range:27-756
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKGKTVNKQT LAALVSALLV FNPAVADEQE SAQMTKPKGA AATGTAKAFQ PKSKQFWWPD QLDLSPLRDH DSRSNPYGES FDYAKAFNSL DLDQVKADID QLLTQSQDWW PADYGNYGPF  FIRMTWHSAG TYRTLDGRGG AGGGQQRFEP LNSWPDNASL DKARRLLWPV KQKYGEALSW SDLIVLAGNV ALENMGFKTF GFAGGRNDDW EPDMVYWGPE VEMLASDRED RDGKLQRPLG  ATHMGLIYVN PEGPKGVPDP LGSAKNIRTA FSRMAMNDEE TLALIAGGHT FGKMHGAHKP KDCLGAEPAA AGIEAQGLGW HNKCGKGHSE DTITSGLEGA WTQAPTKWTS LYLSNLLTYD  WQQTRSPAGA IQWIPTDESV HKAVPDAHVK GKFHAPVMTT ADLALKYDPE YRKIAERFLA DPEEYRLAFA KAWYKLTHRD MGPARNFLGK EVPQGNFIWQ DPIDDKTQSR LSAGDIKQLK  KAISKSGLSV AERVRLAWAS AASYRQSDMR GGANGARIAL APQKDWTVNN PAETAKVLKT LEAIRADFNK GAGKRQVSLA DLIVLAGASA LEQAAKQAGF EVAVPFTPGR GDATQAQTDE  NSFSLLELHA DGFRNYFDVN HSYKSPTEML VDKADQLDLT VPEMTVLVGG LRALDANYQG AKHGVLTQRP GTLNNDFFVN LLDMSTLWQK SDVDGIYQGL DRSSGKPKWT ATSVDLIFGS 
NSELRAVAEV YAFDTSKQKF VDDFVAAWVK VMNLDR 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC BAA-1088 / PV-4".