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Entry information : MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Entry ID 363
Creation 2006-06-21 (Christophe Dunand)
Last sequence changes 2010-09-15 (Haythem Mhadhbi)
Sequence status complete
Reviewer Catherine
Last annotation changes 2022-03-25 (Catherine )
Peroxidase information: MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Name MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Cell culture
Flowers
immature pod walls
Leaves
Root tips
Roots
Seedlings
Inducers beta glucan elicitor preparation from Phytophthora sojae
Colletotrichum inoculation
Glomus intraradices infection
Glomus versiforme infection
Insect damage (Spodoptera exigua, Meloidogyne, Aphib)
Meloidogyne incognita
Methyl jasmonate treatment
Pathogen interaction
Phoma infection
Phosphate starvation
Rhizobium inoculation
Sinorhizobium inoculation
Wounding
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx38
start..stop		 S start..stop
MsPrx12 659 0 1..323 1..323
TrPrx02 614 0 1..323 1..329
GmPrx23 573 0 1..323 1..325
LjPrx04 556 0 1..323 1..322
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '363' 'join(39800392..39800607,39800719..39800919,39801161..39801326,39802752..39803140)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 39800392..39800607 214 N° 2 39800719..39800919 199 N° 3 39801161..39801326 164 N° 4 39802752..39803140 387
join(39800392..39800607,39800719..39800919,39801161..39801326,39802752..39803140 )


exon

Literature and cross-references MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Literature REFERENCE 1. Harrison,M.J. et al., unpublished
REFERENCE 2. Manthey,K., Bartelsmeier,V., Baier,M.C., Meyer,F., Bartels,D., Bekel,T., Linke,B., Grunwald,U., Franken,P., Kuester,H., Perlick, A.M. and Puehler,A. Detection of transcript sequences from mycorrhizal roots of the model mycorrhiza Medicago truncatula genotype A17 - Glomus intraradices using the approach of an EST genome project. Unpublished (2002)
Protein ref. UniProtKB_Uniparc:   Q1SEC3
DNA ref. Phytozome 12:   chr4 (39800392..39803140)
Cluster/Prediction ref. Phytozome Gene 12:   31106365
Omic ref. Gene atlas:   Mtr.47795.1.S1_at Legoo:   Mtr.47795.1.S1_at
Protein sequence: MtPrx38(Medtr4g095450.1[4.0] / Medtr4g095450.1[3.5] / Medtr8g099370.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (298)
PWM (Da):   %s   35284.87 (32445.4) Transmb domain:   %s   i7-24o
PI (pH):   %s   9.13 (9.13) Peptide Signal:   %s   cut: 26 range:26-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGRYNVILVWSLALTLCLIPYTTFAQLSPNHYANICPNVQSIVRS
AVQKKFQQTFVTVPATLRLFFHDCFVQGCDASVLVASSGNNKAEKDHPENLSLAGDGFDTVIKAKAALDAVPQCRNKVSCADILALATRDVINLAGGPSYTVELGRFDGLVSRSSDVNGRLPQPSFNLNQLNTLFANNGLTQTDMIA
LSGAHTLGFSHCDRFSNRIQTPVDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYKNLQQGKGLFTSDQILFTDTRSRNTVNSFATNGNVFNANFITAMTKLGRVGVKNAR
NGKIRTDCSVL

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, 3 introns) and 44 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCGTTATAATGTTATACTTGTGTGGTCACTAGCATTAACGTTGTGTCTTATTCCATATACAACTTTTGCTCAACTTAGTCCAAACCATTATGCTAACATTTGTCCTAATGTTCAA
AGCATTGTAAGATCAGCAGTTCAAAAGAAATTTCAACAAACTTTTGTTACTGTTCCTGCTACCCTTCGTCTCTTCTTTCATGATTGTTTTGTTCAGAGGTAATTAATTTCGGCATTTGTC
AGTTGAGCTAGGACTTCTATAGACTATATTAATATCAGTATAGTGTATTAAAATTTTTGATTTGTGATATGATTATTATTTTGTTATAGGGTTGTGATGCTTCAGTTTTGGTGGCATCAA
GTGGAAATAACAAAGCTGAAAAGGATCATCCTGAAAATTTGTCATTGGCTGGTGATGGTTTTGACACAGTGATTAAAGCAAAAGCTGCATTAGATGCTGTTCCACAGTGCAGAAACAAAG
TTTCTTGTGCTGATATTCTTGCTTTGGCTACTCGAGATGTTATTAATCTGTGGTTTGTTCTTCAACTTGATTTGAATTATTTTACGTTAACGCTTTTCGATTTTTATATTATTTTTTCTC
TCTGTGGTCAGACACCACACATTTGAATTGGATTGTTCATATGTGTCAATACGGTGTCTGAGTTATGTGCACTCAAATAATGTGTACAATTGGTTATGACACGTGATATGATATCAAAAT
CTATGGATAAAAATAAAACTTTGATTTATCACTGTCAATTTCGTACATTACAGGCTGGTGGTCCATCCTATACAGTAGAATTGGGAAGGTTTGATGGTCTAGTTTCAAGATCTTCAGATG
TAAATGGAAGGCTCCCTCAGCCAAGTTTCAATTTGAATCAGCTGAATACTCTCTTTGCAAACAATGGACTCACTCAAACAGACATGATTGCCCTATCAGAGGTAATTGTCGAAGGCCACC
ATTTTAATTAAATGGGTCCCATTAGCATTTAGAAATTTCATTCCAAAACATATATTTTATACGTAAATAAGCTACATATTTCTTACTATGTGTCAAGATTCAAGAGAGTTTTTAAATGGC
GGTAAAAATAAATAGTTTTGAAAAGCCTTGACAAAAAAGATAGTGTTATTTTTTTTAGGAGAAAACGAGAGTTCTAACTTCTAAGTACATAATTAACTTGAAAAGATGACGTATCACATA
AGAAAGAGATTCCTCTTGACAAATGATCGGTTAAGTTTAGATAAAATAATAAAAAAAATAAAAGGACCACTTAAGAATATTTTGGTTACCAGAACTTTTTTTTGGGTATTATTTTAAGGA
AATTAAATTTTTAATATTTTGACATATAGACTAATGCATATACAAATAATTATCATTGGCCAGTTGTCACTTAATTTAATGTGGTCACTAAAAATTATTGAGTTTACTTTTATAGTTTAA
TTTTCGTATAGTCTCTGTTTTTTAATTTTTGCTTTGGAGTTCAATATTGTGTGGATATTTAGATAAATGTTAGTATCATTAGTAATATCAAATGTCAACTTAATTAAATGATTCTTGAAA
AAAGCTTAATTAAATGATGTCACAATCTTGTTTGGTTTTACGTCTCTTTCTACTCTTTACACCTTTGAATATAAGTATAATTTTTTTACAGCAATAATACACTAAAATCAAATCATAATT
TTAATATACATAATCATGGCAAACAGGTTTTACATAATCACTAACAAATTATTTTAAATTTAATTATGTCAACAGACTCATCAAATAATATATCAAATAGTTATAATTTTAATATACATA
GTCATGGTAAATAGGTTTTACATAATCACTAACAAATATTTTAAATTTAATTATGTCAACAGATTCATCAAATAATATATCAAATAGTGAATCAAAATTAAATTTATCTATATGCATTAT
TTATTTTTTTACTTGTTGAATCTCAATAAAACATGTTGTATACTGTTCTCTAGGAGTGAATTATTCATAGACACTAGCTTGAACTGTTTAAAAAATTATTGATAGACTCCATCTTTCAAA
TAATTCATGTATTAAATTAAATACAATAAAACCACAATCATTAGTCAATTCTAATCGAAATCTGATCAAATAATTTATCTCTATTATTAGTTTGGTTTACAAAATAAATTAAGTAAATAT
TTTTTTTTGAAATATCTAAAAAGCTATTATAGTCAGAGCATCCAATCCAAATCACTAAAATAACATTAAGAAAAGAATCTAATCTTGAAGCAAAAGCCAACAAGTAAACAAAACAACAAA
AACTGAACCAGACAGTTCATACTTTTGTAGTATTCACATTTTGTTCCCTCTATGAACGTGCTTATTTTCTTTTTCATATTTTACAGGTGCACACACTCTTGGATTCTCTCACTGTGACAG
ATTCTCCAATAGAATTCAAACTCCAGTGGACCCCACATTGAACAAACAATATGCTGCCCAGTTACAACAAATGTGCCCTAGGAATGTTGATCCAAGAATAGCCATCAACATGGACCCAAC
AACTCCTAGAACATTTGACAATGTTTACTACAAAAATCTTCAACAAGGAAAAGGTTTATTTACTTCTGATCAAATCCTCTTCACTGATACAAGATCAAGGAACACTGTTAACTCTTTCGC
GACTAACGGTAACGTTTTCAATGCCAATTTCATCACTGCCATGACCAAGTTGGGTCGTGTTGGAGTTAAAAATGCGAGAAATGGGAAAATTCGTACCGATTGTTCTGTGCTTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTCGTTATAATGTTATACTTGTGTGGTCACTAGCATTAACGTTGTGTCTTATTCCATATACAACTTTTGCTCAACTTAGTCCAAACCATTATGCTAACATTTGTCCTAATGTTCAA
AGCATTGTAAGATCAGCAGTTCAAAAGAAATTTCAACAAACTTTTGTTACTGTTCCTGCTACCCTTCGTCTCTTCTTTCATGATTGTTTTGTTCAGGGTTGTGATGCTTCAGTTTTGGTG
GCATCAAGTGGAAATAACAAAGCTGAAAAGGATCATCCTGAAAATTTGTCATTGGCTGGTGATGGTTTTGACACAGTGATTAAAGCAAAAGCTGCATTAGATGCTGTTCCACAGTGCAGA
AACAAAGTTTCTTGTGCTGATATTCTTGCTTTGGCTACTCGAGATGTTATTAATCTGGCTGGTGGTCCATCCTATACAGTAGAATTGGGAAGGTTTGATGGTCTAGTTTCAAGATCTTCA
GATGTAAATGGAAGGCTCCCTCAGCCAAGTTTCAATTTGAATCAGCTGAATACTCTCTTTGCAAACAATGGACTCACTCAAACAGACATGATTGCCCTATCAGGTGCACACACTCTTGGA
TTCTCTCACTGTGACAGATTCTCCAATAGAATTCAAACTCCAGTGGACCCCACATTGAACAAACAATATGCTGCCCAGTTACAACAAATGTGCCCTAGGAATGTTGATCCAAGAATAGCC
ATCAACATGGACCCAACAACTCCTAGAACATTTGACAATGTTTACTACAAAAATCTTCAACAAGGAAAAGGTTTATTTACTTCTGATCAAATCCTCTTCACTGATACAAGATCAAGGAAC
ACTGTTAACTCTTTCGCGACTAACGGTAACGTTTTCAATGCCAATTTCATCACTGCCATGACCAAGTTGGGTCGTGTTGGAGTTAAAAATGCGAGAAATGGGAAAATTCGTACCGATTGT
TCTGTGCTTTAA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ACTAGTCTAT TCATATATTC TAGTACCCTT TTGCAAATGG GTCGTTATAA TGTTATACTT GTGTGGTCAC TAGCATTAAC GTTGTGTCTT ATTCCATATA CAACTTTTGC TCAACTTAGT  CCAAACCATT ATGCTAACAT TTGTCCTAAT GTTCAAAGCA TTGTAAGATC AGCAGTTCAA AAGAAATTTC AACAAACTTT TGTTACTGTT CCTGCTACCC TTCGTCTCTT CTTTCATGAT  TGTTTTGTTC AGGGTTGTGA TGCTTCAGTT TTGGTGGCAT CAAGTGGAAA TAACAAAGCT GAAAAGGATC ATCCTGAAAA TTTGTCATTG GCTGGTGATG GTTTTGACAC AGTGATTAAA  GCAAAAGCTG CATTAGATGC TGTTCCACAG TGCAGAAACA AAGTTTCTTG TGCTGATATT CTTGCTTTGG CTACTCGAGA TGTTATTAAT CTGGCTGGTG GTCCATCCTA TACAGTAGAA  TTGGGAAGGT TTGATGGTCT AGTTTCAAGA TCTTCAGATG TAAATGGAAG GCTCCCTCAG CCAAGTTTCA ATTTGAATCA GCTGAATACT CTCTTTGCAA ACAATGGACT CACTCAAACA  GACATGATTG CCCTATCAGG TGCACACACT CTTGGATTCT CTCACTGTGA CAGATTCTCC AATAGAATTC AAACTCCAGT GGACCCCACA TTGAACAAAC AATATGCTGC CCAGTTACAA  CAAATGTGCC CTAGGAATGT TGATCCAAGA ATAGCCATCA ACATGGACCC AACAACTCCT AGAACATTTG ACAATGTTTA CTACAAAAAT CTTCAACAAG GAAAAGGTTT ATTTACTTCT  GATCAAATCC TCTTCACTGA TACAAGATCA AGGAACACTG TTAACTCTTT CGCGACTAAC GGTAACGTTT TCAATGCCAA TTTCATCACT GCCATGACCA AGTTGGGTCG TGTTGGAGTT  AAAAATGCGA GAAATGGGAA AATTCGTACC GATTGTTCTG TGCTTTAATC AAGTGTATAA TGTAAGCTGG GGAAGTCACA AAGGGTGACT ATAGATTATT TGTTAATTAA TGTTAATAAA  TTTGTTTGCC AACAAATTAA GAGTGGTTTG GATGTTAAAA AAAGGAAGAT AAGGGGAGAG AAAAAATTGA GCTTTTCTTT GATGTAATTT AAGTTCCAAA TAATTCAGTG TCCCCTATAT 
TTATGAACTT TGAATTGTTT ATTGAAAATG AATAAGAGTG CTGCT 

Retrieve as FASTA