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Entry information : NtPrx50-1B(Nitab4.5_0002131g0020)
Entry ID 3767
Creation 2006-08-25 (Christophe Dunand)
Last sequence changes 2011-04-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2022-08-12 (Christophe Dunand)
Peroxidase information: NtPrx50-1B(Nitab4.5_0002131g0020)
Name NtPrx50-1B(Nitab4.5_0002131g0020)
Class Class III peroxidase    [Orthogroup: Prx016]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx50-1B
start..stop		 S start..stop
NtPrx50-1A 627 0 1..317 1..317
LePrx81 560 0 1..317 1..318
LePrx110 486 2.3e-172 1..341 1..340
IaquPrx05 446 3.46e-156 6..317 13..323
Literature and cross-references NtPrx50-1B(Nitab4.5_0002131g0020)
Literature Nozawa A., Yamamoto Y., Devi R.S., Tanaka H., Matsumoto H. Isolation and characterization of a peroxidase gene over-expressed in an aluminum-tolerant cultured cell line
Protein ref. UniProtKB:   Q50LG4
mRNA ref. GenBank:   AB178954.1
Protein sequence: NtPrx50-1B(Nitab4.5_0002131g0020)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   463 (441)
PWM (Da):   %s   50491.29 (48040.9) Transmb domain:   %s   i5-27o
PI (pH):   %s   10.55 (10.58) Peptide Signal:   %s   cut: 23 range:23-463
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDKKIILLSF LCISLQLSFV SAQLQVGFYN TKARCPRAES IVRDTVRSRF FADRSITAAL LRMYFHDCFV RGCDASILID SKNTKNKKSE KNAGANGSVR GYELIDQIKS KLEATCAMTV  SCADIIALAT RDAVALAGGP SYSIPTGRRD GLVSDPSQVN LPGPSLTVPQ AFQFFKNKGF TMNDMVTLLG GHTVGITHCS LFKGDRLSRA DGSMDTNLFN RLRKTCSSSG DPSVFLDQNT  SFVVDNSFYK QLRLKKGILK VDQLLASDKS TAGAVANFAA NPRAFQQAFA NALIKLGNTQ VLTGKSGEIR RNCRAFNPPQ LKSPPPPPPK IVKSPPPPPP KILKSPPPPP PKYQSNFLAN 
FTITGAETRF KSTDESVRKL EAQLQSYMLS NDSRIEDLGK KINKLMKRII SPQGEILGSA PTEGLQIMWS GNRPRTWENG KSSLGRSQGN FSHSGGKFHI LKE 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Uncorrect prediction from SGN (splicing error intron 1). Long C-Term Proline rich.
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACAAGA AGATAATATT ACTGTCTTTC TTGTGCATTA GTCTTCAGCT ATCATTTGTC TCAGCTCAAC TTCAAGTTGG TTTTTATAAT ACTAAAGCTA GATGTCCACG AGCAGAAAGC  ATAGTTCGAG ATACGGTGCG AAGCCGCTTC TTTGCGGATC GTTCCATCAC GGCGGCATTG TTGCGGATGT ATTTTCATGA CTGCTTCGTC AGGGGTTGCG ATGCTTCAAT ATTGATAGAC  TCCAAAAACA CAAAGAACAA AAAGTCAGAA AAAAATGCAG GAGCAAATGG GTCAGTACGA GGATACGAGC TGATTGATCA GATAAAGAGT AAATTAGAGG CTACATGTGC TATGACAGTC  TCTTGTGCAG ACATCATTGC ATTAGCCACC CGAGATGCAG TTGCATTAGC CGGAGGACCG AGCTACAGCA TTCCCACCGG TAGGCGCGAT GGGCTAGTGT CAGACCCATC ACAAGTGAAC  TTGCCGGGCC CTAGTTTAAC CGTGCCACAA GCATTTCAAT TTTTCAAAAA CAAAGGGTTT ACTATGAATG ACATGGTGAC TCTTTTAGGT GGCCACACCG TGGGAATTAC ACATTGTAGT  TTGTTTAAAG GCGATAGGCT ATCAAGGGCA GATGGGAGCA TGGATACTAA CTTGTTTAAC CGCCTTAGAA AGACATGTTC TTCTAGTGGT GACCCATCTG TTTTCTTGGA CCAAAACACT  TCATTTGTTG TCGATAATTC CTTTTACAAA CAGCTAAGGT TGAAGAAAGG GATATTGAAG GTTGATCAGT TACTTGCTTC TGACAAATCA ACCGCTGGGG CTGTGGCGAA TTTTGCTGCT  AATCCAAGAG CCTTCCAACA AGCTTTTGCA AATGCATTGA TCAAGTTAGG TAACACTCAA GTTCTAACAG GGAAATCAGG AGAAATCAGA AGAAATTGTA GAGCCTTTAA TCCTCCTCAA  CTTAAGAGCC CTCCTCCTCC TCCCCCCAAG ATCGTAAAGA GTCCTCCCCC TCCTCCTCCT AAGATCTTAA AGAGTCCTCC TCCCCCACCA CCCAAATATC AGAGTAACTT CCTGGCCAAT  TTCACGATTA CAGGAGCAGA AACAAGGTTT AAATCTACTG ACGAATCAGT TAGAAAGTTA GAAGCACAAT TACAGAGTTA CATGTTGTCA AATGATTCGC GAATTGAAGA TTTAGGTAAA  AAAATTAACA AGCTAATGAA GAGGATCATT TCCCCACAAG GAGAAATCCT GGGAAGTGCA CCGACTGAAG GTCTGCAAAT TATGTGGTCT GGTAATCGAC CACGAACTTG GGAAAATGGC 
AAATCTTCTT TGGGTCGATC ACAAGGGAAC TTCTCTCATT CAGGTGGGAA ATTCCATATT TTGAAGGAGT AG 

Retrieve as FASTA