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Entry information : ZmPrx03_Wis93 (pox3)
Entry ID 3818
Creation 2006-08-28 (Christophe Dunand)
Last sequence changes 2006-08-28 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2007-11-13 (Christophe Dunand)
Peroxidase information: ZmPrx03_Wis93 (pox3)
Name (synonym) ZmPrx03_Wis93 (pox3)
Class Class III peroxidase     [Orthogroup: Prx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx03_Wis93
start..stop		 S start..stop
ZmPrx03 725 0 1..357 4..360
ZmPrx03_F66 723 0 1..357 1..357
ZmPrx03_Du101 723 0 1..357 1..357
ZmPrx03_W64A 723 0 1..357 1..357
Literature and cross-references ZmPrx03_Wis93 (pox3)
Literature Guillet-Claude,C., Birolleau-Touchard,C., Manicacci,D., Rogowsky,P.M., Rigau,J., Murigneux,A., Martinant,J.P. and Barriere,Y. Nucleotide diversity of the ZmPox3 maize peroxidase gene: relationships between a MITE insertion in exon 2 and variation in forage maize digestibility. BMC Genet. 5 (1), 19 (2004)
Protein ref. UniProtKB:   Q6RFK5
DNA ref. GenBank:   AY500790
Protein sequence: ZmPrx03_Wis93 (pox3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (336)
PWM (Da):   %s   38241.35 (35956.1)  
PI (pH):   %s   6.96 (5.73) Peptide Signal:   %s   cut: 22 range:22-357
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TKRHCLRFTT VLATTLLSAT AACLDVGFYD RTCPTAETIV QQTVAAAFRN NSGVAPALIR MHFHDCFVRG CDGSVLIDTV GNLTAEKDAP PNNPSLRFFD VVDRAKASLE AQCPGVVSCA  DVLAFAARDS VVLSGGLGYQ VPAGRRDGRI SNDTEALNNL PPPFFNATEL ADRFASKNLT IEDLVVLSGA HTIGVSHCSG FAGPTDLNGP VDRLYNFSSP DGIDPTLSKA YAFLLKSICP 
ANTSQFFPNT TLFMDLITPE RFDNKYYVGL TNNLGLFKSD VALLTNATMK ALVDSFVRSE ATFRTKFARS MIKMGQIEVL TGTQGEIRRN CRVINPVSAT DDVVLARPSG FTGVAAS 

Retrieve as FASTA  
Remarks Partial sequence from genomic (first AA are missing). Relationships with variation in cell wall digestibility. Also present in different cultivars with a MITE seq in the exon 2: Wis93-3520 (AY500790), Wis94-443 (AY500788)