View Redoxidase 4015

Entry information : AtPrxQ (At3g26060 / PRXQ / Thioredoxinreductase)

Entry ID	4015
Creation	2006-10-30 (Jean-Pierre Jacquot)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-04 (Achraf Jemmat)

Peroxidase information: AtPrxQ (At3g26060 / PRXQ / Thioredoxinreductase)

Name (synonym)

AtPrxQ (At3g26060 / PRXQ / Thioredoxinreductase)

Class

Atypical 2-Cysteine peroxiredoxin (type Q) [Orthogroup: PrxQ001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

Chloroplastic

Tissue type

Leaves

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPrxQ start..stop	S start..stop
AlyPrxQ	429	5.9e-156	1..216	1..216
TsPrxQ01	368	6.63e-132	3..216	2..215
AhalPrxQ01	360	5.47e-129	40..216	1..177
ThasPrxQ01	330	5.96e-117	3..216	2..216

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4015' 'join(9524807..9525010,9525492..9525629,9525722..9525811,9525905..9526123)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	9524807..9525010	202	N° 2	9525492..9525629	136	N° 3	9525722..9525811	88	N° 4	9525905..9526123	217
join(9524807..9525010,9525492..9525629,9525722..9525811,9525905..9526123)

Literature and cross-references AtPrxQ (At3g26060 / PRXQ / Thioredoxinreductase)

Literature	Lamkemeyer et al Plant J 2006, Rouhier & Jacquot Free Radic Biol Med 2005
Protein ref.	UniProtKB: Q9LU86
DNA ref.	Phytozome 12: Chr3 (9524807..9526123)
Cluster/Prediction ref.	Phytozome Gene 12: 19659138 UniGene: At.20459
Omic ref.	ePlant: At3g26060 TAIR: At3g26060

Protein sequence: AtPrxQ (At3g26060 / PRXQ / Thioredoxinreductase)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	216
PWM (Da):	23592.23	Transmb domain:	o269-291i
PI (pH):	10.06

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAASSSSFTLCNHTTLRTLPLRKTLVTKTQFSVPTKSSESNFFGSTLTHSSYISPVSSSSLKGLIFAKVNKGQAAPDFTLKDQNGKPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRD
SYEKFKKAGAEVIGISGDDSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLKAA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (3 introns), 5 cDNA and 97 ESTs Incorrect prediction from Phytozome (splicing error).

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

CATGTCAATC AGCTGTGTTT CTTCTAGTAA TACCGAGAAA ACTATTGTGG GGAGGCCCCA GAACGGTTCT AGGAGTGCAG TGAAAGCAGA CAAGAAGAAG AGATCAGGTC CAAGTTCAGT TCACATGTCA CTCAATTTTG CTTCTTCTAC TCTTCGTACG ACCAAAGAAG CCCCAAAAAC ACTGGCAAGA AACTCCACTA CACAGGGAAC AACTTCAACA AATGCTAGAA ACAAACTTTT CCCAAAGATA AACGAACCAA CGGGAGCTTT AAAAAGCTGC AAGAGACCAT TGTCTCAGAC ATCCAAAGAC GGTTCAACCA ATGTAATTCT CTTCCCAAGT TTCTCTTCTT GCGTATATCC CAAGCATATT TGCTGAGACT GACTCTTACA TATATTGCAG GCCTCTGCTG TCACGTTACC CAGACTTCCT CTTCTCAGTA ATCTGCTATC AGAAAACAAA AGGTTACTGA TCAAACCATC TTCAACACCA ATTCATCGCT TTATACTATT ACTTTATTAT TAACTCAACC CTATAATTAA CTTTGCTTCT TCTGATATAC AGGAAAAACA TATCTGTAAG GAGTTCAGTT TCATGTAGAA TATCCAACAA TGAGCAAAGA AAACCTTCTG TCGGGTAAGC GGTTTAAGTA CCAACCTCTT AGAGAAATAC TATCTTATGT CACTTACTGC AAATGGCCTG AGTTGGTTAA TTGAAAGTGT TTGTGTTAGT TCCCTGATTT ATGTGGACAT AAGACGAGAT GTTTTTGTCT AATGCATTTT GCAGCTGTGA AAATCTGTCA ACTCATAGCA GAACCAAAGC AAAGTCTTTG ACTGTATCTT CTCCCTTCGT CTTCAGAAGT GATGAAAGGG CAGAGAAGAG GAAAGAGGTA GAACTAAAGA AGATCCTTTT ACTTTATCTT TGAGATTATT TGAGGACTTA TAGAGCCGTA GTTTAAAAAA GATCTCTTTT GTTGTGGATG TGTCTTGTCT GTTAGTTCTT CAAGAAAGTA GAGGAAAAAA ACAAGAAAGA GAAAGAGGAT AAATTTTCTT GCGGCTTCAA GGCAAATCAA AACACTAACT TAGCATCTGA AGAACACAAG AACCCACAAG TTGGTGGTTT TCAGGTATAT TCAACTCTCA GACTGTAACT TGTCATAAAT TTGGGTATTG AATCTTTGAT GTATGACATT ATAATCATGT GCAGGTAACA CCGATGACCC TGACTTCACC AAGATTCCGC AGGAACCAAA CTCCAGGAAA AGAGAACATA AAAAAACCTC ATCAAACTCC TCATAAAGCT TCCTCAATGA AGATCATCAA CACCAAAAAA GTAGTCATGG AGAAGCACAA AAGCAGCAAG ATCCATCCCT CCTCCAAACA GCAGACAACA AAAAGAACTC AAGAAAATAT GTCTCCTAAT ATTCTTCAGA ACTAACCAGA GACAAACCAG ATCAATCGAT TCCTCTTCTT CAAGTCTCTA GATCATCGTA AAGATTCGAC TTTTCACTTT GAAGATTCCG AAAGTTTTGT CCCTTCAGCT AGTAATCTCA TCTCAAGCTT ATGGTTTAGG TGACTAGCCC TTGATTCAGA TTGTGTAACC ACAAGCTTTT AAGGAGCTGT GTAGAATAGA TAGAACTCAA GTCTACTTAC TCTTCAAAGT AACTATGTAC TCAATAGTTC TGTAGTATCA ATCTTGTATC ATTTGTATAC ATAGAGATTT GAAATAAAGA ATTATGTCTA CTTTTCAATT TCTCATTGTG TTTCTTTCTT GAATTAGTAT AGACAGGAAC ATGGCAAAGC TTTCTGTTTT ACATTTGTTT TAAACGACGA CGTTTTGGTA TGATGTTGTG ATGTTGTGTT GTTGTGGTGT GGGCCTCTCG TTTCAGAGGT GAGAGAAAAA ATCTTATCTC TGTGGACTGT
GATTGTGTGA TGTTTCCATA TCTTCAGCTT TTCTTCTACT ACATGCTCTA ATCACGTCCT TGTAGAGGAA AAGAAAAAAA

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TCATTCTCTC TTTCTCTTCT TTCTCTTCTT TCATGCATGT CTCATGTCTG TCTCCATGAG ACCATGACCT TCTTATATTG TTTCTGTTGA GTATGAATTT TCAATAATAC CATGTTATAC CAATGAGAAG GGAGTTGGCT TTGGTCTAGT ACAAAGATCA CAACAGGATA AGTACTGAAG TGTGGTTAAA ATGTTAGTTG GTTCTGTGTA TTTGAGTCTC TCGTTTTCAT TGTGAACACC TCTACTATCT CTTTCTCTTG TATCAATTAA CACTTCAAGT AAGGTACACA TATCAGGTAA CTCTAGCTAG CCCTTGATTA AAATTGTCAA ACACAAAGCT TTAAGGAATT GTGTAGAATA CATAGAACTC AAGTCTTCAC ACAATAGTTT TAGTATGTGA ACTCAAGTAC TCAATAGTGT TGTGGTCTCA ATCTAATATT TGAAATTTAA AACGGTTATT TTCGCATTGT GTTTCTTTCT TGATTTGAGT ATAGACAGGA ATAAAGGTAG AGCCTTTGGA CTGTATGAAG AATATGGCAA AGCTCTGTTT TTTTACGCAT TTGTATTAAA TGACGTCGTA TAAGTCGGAG CACCGAGGGC CTCTCGTTTC ATGAGAGAAA CAAAAAATCT TATCTTTCTG ACAACGGTGG TGGTGTGTGA TGTTGTCAGC CATGGCAAAG ACAGAGCTAC AACGATCTCT CTCTCTTTTC TTCTTCTTCT GTGTCTGTCT TTAAATAGAG TCTCTTTGAA ACGAAGCAGC TTTGTCCTGT TCTGATATCC ATGGCTTTAC CTTCGTGCTT AAAGACTGGA GCTTTAATGT CTCCGGCCAC TGGATTTAAT TTTTCCGGCA GTCTTATGAA GTCAGACAGC GGCTTCGCCG TTCCGACAAA GTTACAGAGT ACTCGAAAAG GTGATCGAGA GAGATTGAGA GTCCAAGCTA TTTTCAGTTT CCCTCCTGCG
TTTCTGACAA GAAACGGTCG AGCTGAGAAA CAGAAACAGC

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTGCTTCATCTTCCTCTTTCACTCTCTGTAATCACACCACACTTCGTACTCTCCCTCTGAGAAAGACCCTTGTCACCAAAACCCAATTTTCAGTTCCCACAAAATCATCAGAATCT
AACTTCTTTGGCTCCACACTCACTCACTCATCGTATATCTCCCCAGTCTCTTCCTCTTCTCTCAAAGGCTTAATCTTTGCCAAGAGGTACATTTCTCGACTCTTGCATTGATAGATTGTT
TGCTACAGTTGGGTAACAACTAGTTCTGGGAATTAGCTTCTTTGTTAGACCAATGTTTTTTGGACAATCTAAGTTCTGTTCCATTTCTTTTTTATATGTTTTTGAGTATTACGATATAAA
TATTAGCAAGACAATAGATTGTTAGATACACAGCCATTTTTGAATAAGAAACAAAAGATGTAAATATTGGGTTTTAAGTCTGAATTTAAATGTTATAAGAACAGATTTATGAATGTGTTA
GTGCAGAATCAAAGACAAAATCAAAGAAACTTGTAATCAGTGTTTGTTTTAGAGACCATAAACTTTCACATACCTGAAAATAAGCAAATGCTAGAATGTTCTTGAATATGTTCAATCCTT
TATTCATATGATTTAAGCTGACACGGCATATGAACTCTCTTTAACCTTCTGTGAATTGGTCTCTTTGTGATGTTTGGTGGGCAGCAGGTTAACAAGGGTCAGGCTGCACCAGACTTCACA
CTAAAGGATCAAAACGGAAAGCCGGTGAGCCTCAAAAAGTATAAAGGGAAGCCTGTTGTTCTCTACTTCTACCCTGCAGATGAAACCCCTGGCTGCACCAAGCAGAGGTTGTTAAATCTT
TACTTTCTCCTCCTTCCCGCATTCATTGATCGCATATTTAGTGTTTCTAAACGTAAATGGTTTTACTTGTGTACAACAGGCTTGTGCTTTCAGAGACTCTTATGAGAAATTCAAGAAAGC
TGGTGCAGAGGTCATTGGCATTAGTGGAGATGACTCTGCTTCTCACAAGAGGTACACACATCAAAAATCTCTGGTTTCTTGAATAAACCCATTTCTTTTTTCCGGATTTTAAAGAGAGTG
GTGGGACTTTAAACATTGTTGCAGGCGTTTGCAAGCAAATACAAACTACCGTATACATTGTTAAGCGACGAAGGGAATAAGGTGAGAAAAGATTGGGGAGTGCCTGGAGACCTGTTTGGA
GCATTGCCAGGGAGACAGACTTACGTTCTTGACAAAAACGGTGTTGTTCAGCTCATCTACAACAACCAGTTCCAGCCTGAGAAACACATCGACGAGACCTTGAAGTTTCTCAAAGCTGCT
TGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GTGATTGTGT GATGTTTCCA TATCTTCAGC TTTTCTTCTA CTACATGCTC TAATCACGTC CTTGTAGAGG AAAAGAAAAA AAATGGCTGC TTCATCTTCC TCTTTCACTC TCTGTAATCA CACCACACTT CGTACTCTCC CTCTGAGAAA GACCCTTGTC ACCAAAACCC AATTTTCAGT TCCCACAAAA TCATCAGAAT CTAACTTCTT TGGCTCCACA CTCACTCACT CATCGTATAT CTCCCCAGTC TCTTCCTCTT CTCTCAAAGG CTTAATCTTT GCCAAGGTTA ACAAGGGTCA GGCTGCACCA GACTTCACAC TAAAGGATCA AAACGGAAAG CCGGTGAGCC TCAAAAAGTA TAAAGGGAAG CCTGTTGTTC TCTACTTCTA CCCTGCAGAT GAAACCCCTG GCTGCACCAA GCAGGCTTGT GCTTTCAGAG ACTCTTATGA GAAATTCAAG AAAGCTGGTG CAGAGGTCAT TGGCATTAGT GGAGATGACT CTGCTTCTCA CAAGGCGTTT GCAAGCAAAT ACAAACTACC GTATACATTG TTAAGCGACG AAGGGAATAA GGTGAGAAAA GATTGGGGAG TGCCTGGAGA CCTGTTTGGA GCATTGCCAG GGAGACAGAC TTACGTTCTT GACAAAAACG GTGTTGTTCA GCTCATCTAC AACAACCAGT TCCAGCCTGA GAAACACATC GACGAGACCT TGAAGTTTCT CAAAGCTGCT TGATCATTCT CTCTTTCTCT TCTTTCTCTT CTTTCATGCA TGTCTCATGT CTGTCTCCAT GAGACCATGA CCTTCTTATA TTGTTTCTGT TGAGTATGAA TTTTCAATAA TACCATGTTA TACCAATGAG AAGGGAGTTG GCTTTGGTCT AGTACAAAGA TCACAACAGG ATAAGTACTG AAGTGTGGTT AAAATGTTAG TTGGTTCTGT GTATTTGAGT CTCTCGTTTT
CATTGTGAAC ACCTCTACTA TCTCTTTCTC TTGTATCAAT TAACACTTCA AGTAAGG

Retrieve as FASTA