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Entry information : OmyPGHS01
Entry ID 4133
Creation 2006-12-06 (Christophe Dunand)
Last sequence changes 2006-12-06 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2006-12-06
Peroxidase information: OmyPGHS01
Name OmyPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Actinopterygii Salmonidae Oncorhynchus
Organism Oncorhynchus mykiss (Rainbow trout)    [TaxId: 8022 ]
Cellular localisation N/D
Tissue types Macrophage/monocyte
Mixed tissues
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OmyPGHS01
start..stop		 S start..stop
SfoPGHS01 1199 0 28..624 1..598
DrPGHS01 981 0 28..624 1..597
PretPGHS01 954 0 28..624 1..595
MunPGHS01 954 0 28..613 1..585
Literature and cross-references OmyPGHS01
Literature Wang,T., Steward,I., Holland,J., Zou,J. and Secombes,C.J. Cloning of rainbow trout cyclooxygenase-1 (COX-1) gene and analysis of its expression in relation to factors that modulate COX-2 expression
Protein ref. UniProtKB:   Q9DEQ0
Cluster/Prediction ref. UniGene:   Omy.11882
Protein sequence: OmyPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   624 (575)
PWM (Da):   %s   71606.81 (66049.0) Transmb domain:   %s   o5-27i
PI (pH):   %s   6.77 (6.90) Peptide Signal:   %s   cut: 50 range:50-624
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSAAYIIFAL LYWEDAPAEG AYAVNLTMRE CVVWVWACIL LQRLPTCRGE EVEDASTVVN PCCYYPCQNW GVCVRFGIDR YECDCTRTGF YGQNCTIPEF WTRVHQQLKP SPDVVHYILT  HFHWLWNLIN RTFMRDWLMR VVLTVRSNLI PSPPTFNSKY GYLSWESYSN VSYYTRILPP VPEDCPTPMG TKGKSVLPDP KLVVEKFLLR RQFRRDPRGT NLMFAFFAQH FTHQFFKTRN  SMGLGFTRAL GHGVDAGNVY GDNLVRQLNL RLLKDGKMKY QVVKGEVYPP TVAEAAVNMR YPQETPVGQR MAIGQEVFGL LPGLTMYATL WLREHNRVCD ILKAEHPTWG DEQLFQTARL  IVIGETIRIV IEEYVQHLSG YLLDLKFDPV LLFKSTFQYR NRIAVEFKQL YHWHPLMPDS FHIDGDEVPY SQFIFNTSIV THYGVEKLVD AFSRQCAGQI GGGRNIHPVV TNVAEGVIEE  SRTLRLQPFN EYRKRFNLKP YTSFSDFTGE EEMARELEEL YGDIDALEFY PAIMLEKTRP NAIFGESMVE MGAPFSLKGL LGNPICSPEY WKPSTFGGQT GFDIVNSASL ERLVCLNTNW 
CPYVAFNVPP AGQEEPPRKQ STEL 

Retrieve as FASTA  
Remarks Complete sequence from 2 cDNA and 5 ESTs