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Entry information : MtPrx81 (Medtr4g029170.1[4.0])
Entry ID 415
Creation 2005-08-11 (Christophe Dunand)
Last sequence changes 2014-07-16 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2014-07-16 (Christophe Dunand)
Peroxidase information: MtPrx81 (Medtr4g029170.1[4.0])
Name (synonym) MtPrx81 (Medtr4g029170.1[4.0])
Class Class III peroxidase    [Orthogroup: Prx010]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type Roots nodules
Inducer Sinorhizobium inoculation
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx81
start..stop		 S start..stop
MtPrx49 566 0 1..321 1..321
GmPrx96 478 7.94e-172 1..321 1..319
GmPrx97 474 2.64e-170 1..321 1..319
GmPrx128 473 5.32e-170 1..321 1..319
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 10062032..10062247 214 N° 2 10061354..10061548 193 N° 3 10060244..10060798 553  
complement(join(10060244..10060798,10061354..10061548,10062032..10062247))


exon

Literature and cross-references MtPrx81 (Medtr4g029170.1[4.0])
Literature Journet,E.P. et al., unpublished
DNA ref. Phytozome 12:   chr4 (10062247..10060244)
Cluster/Prediction ref. Phytozome Gene 12:   31111272
Omic ref. Gene atlas:   Mtr.40970.1.S1_at Legoo:   Mtr.40970.1.S1_at
Other ref. Medicago_jcvi:   23234
Protein sequence: MtPrx81 (Medtr4g029170.1[4.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (296)
PWM (Da):   %s   35060.53 (32216.1)  
PI (pH):   %s   8.14 (7.65) Peptide Signal:   %s   cut: 26 range:26-321
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSHRYFSMFFHAIVLAALATKTFSALTTNYYDYTCPNALSTIRS
VVEAAVEKENRMGGSLLRLHFHDCFVNGCDGSILLDSTPSMDSEKNANPNINSARGFEVVDEIKDAVDKACGKPVVSCADILAVAARDSVVALGGPSWKVKLGRRDSKTASRADADSGNIPGPAFSLSQLIKNFDNKGLNEKDLVAL
SGAHTIGFSRCLLFRDRIYNDKNIDANFAKQLQDICPREGGDSNLAALDCVTPAKFDEAYYMELIKKKGLLHSDQELLNGDYTGSLVRKYRRDTSAFYNDFAKSMIKMGNIKPLTGSQGE
IRSNCRRAN*

Retrieve as FASTA  
Remarks Complete sequence from 2 ESTs and genomic (chromo 4, introns).

DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTCACATAGGTATTTCTCAATGTTCTTCCATGCAATAGTGTTAGCAGCACTTGCAACCAAAACATTTTCAGCACTCACAACAAATTATTATGACTACACATGCCCTAATGCTTTG
AGCACTATTAGAAGTGTTGTTGAAGCTGCAGTTGAAAAAGAGAATCGTATGGGTGGCTCTTTACTACGCTTGCATTTTCATGATTGCTTTGTTAATGTAAGATTTATCAATTTAGTCGCT
AAATATTATATTACTACTAGAAAAACTAAAATGAGAACAAACCCTTCTAAAGTTATAAGCAAATTTGTAGATATCCCAATTTTATTTATTTTTTACCAAAGTGAAAATTATTTATAGATT
TTCACTCTATTTACTCCAACAAAATTTAGAGAAGATTTTAAATTTTTGGTCTCTACATTTTCCTTTCTAATTTTCACTTTTTTAGTAGTGTTAACAATTATATTATAATTTAGTTACTAT
TCCAAATCAATCATTAAACAGTTAATAAATTTATTTAATGATTAATTTAGATAATAATGTGATTCATAATTTGAAAATTGGTCAATAAATAAATTGTTACGATAACTATAAAAAAAAAGA
TTTAAATGTGTTGCTAAACAGCAAATTTTTGTAGCTTATATATGTGTTAATATTAATTATTAAGTGATAGTTAATTTTTTAATTTTTATGGTGATTCAGGGGGTTGTGATGGTTCAATTC
TTCTAGACTCTACACCTTCGATGGACAGTGAAAAAAATGCAAATCCAAATATAAATTCAGCAAGAGGATTTGAAGTTGTTGATGAGATTAAGGATGCTGTTGATAAAGCATGTGGAAAAC
CAGTTGTTTCTTGTGCAGACATTTTGGCTGTAGCTGCAAGAGACTCTGTCGTTGCGGTTAGTAATATTCTACATTTTAATATATATTTTTAATTTTATTTTGAACTAGTCGGTAATTTTA
AAACAGAATTAGTCATCAAATGAATAAAATAAAGTTTATATATGAAATTTTTTAACTTATCTTTACTCGGTTTAGGTTAACAAGTATACCACCAACTTTGAATATATCAAAATTAAAATG
ACCAAAGTTGTATAACTTGCTAATAAATTTATTTTACTGAGTCGATTTTACTTATTATATTAGTCTTTACTATTTGAATATATCAAAGTGAAGCTACACAAGTTACATGCATGCTACAAA
TATTTTTTTCGTAAACTAATTTCTTTCTTTTGATTGAGTAAACTAATGTATATTTTAGACATAAAAAGAATAATATCACTAGATTATTAAGATTTTTTTATTGATTTACATCTCTTATCA
TATATTTTCTGGTCTTCATTCATTCCATACGTGTATATATTGATTTAGAGATTTTTCAAATCCTACAAAAACTTTTTCAATATCTTACGAAATTTAAATTGAAATTTACTTACAATTATA
TATGGATGCAGTTTTAGGAGGACCATCATGGAAAGTGAAACTAGGAAGAAGAGACTCAAAGACAGCAAGTCGTGCCGATGCAGATTCAGGCAATATCCCCGGACCAGCATTCAGTCTTTC
TCAACTCATCAAAAACTTCGACAATAAAGGCCTAAACGAAAAAGACCTCGTTGCCCTATCTGGAGCACACACTATTGGATTTTCGCGCTGTCTTTTATTTAGAGACCGAATCTACAATGA
CAAAAACATCGATGCAAACTTCGCAAAACAGCTTCAAGACATTTGTCCCAGAGAAGGCGGAGACTCCAACCTTGCAGCTCTGGACTGTGTTACACCGGCAAAATTCGATGAGGCATATTA
CATGGAACTGATTAAAAAGAAAGGGCTTCTTCATTCGGATCAGGAATTATTGAATGGTGATTATACTGGATCGTTGGTTAGAAAGTATAGGCGCGATACAAGTGCTTTCTACAACGACTT
TGCGAAATCTATGATTAAGATGGGAAATATTAAGCCACTTACTGGGAGTCAAGGTGAAATTCGTTCAAATTGCAGGAGAGCCAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTCACATAGGTATTTCTCAATGTTCTTCCATGCAATAGTGTTAGCAGCACTTGCAACCAAAACATTTTCAGCACTCACAACAAATTATTATGACTACACATGCCCTAATGCTTTG
AGCACTATTAGAAGTGTTGTTGAAGCTGCAGTTGAAAAAGAGAATCGTATGGGTGGCTCTTTACTACGCTTGCATTTTCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATTCTTCTA
GACTCTACACCTTCGATGGACAGTGAAAAAAATGCAAATCCAAATATAAATTCAGCAAGAGGATTTGAAGTTGTTGATGAGATTAAGGATGCTGTTGATAAAGCATGTGGAAAACCAGTT
GTTTCTTGTGCAGACATTTTGGCTGTAGCTGCAAGAGACTCTGTCGTTGCGTTAGGAGGACCATCATGGAAAGTGAAACTAGGAAGAAGAGACTCAAAGACAGCAAGTCGTGCCGATGCA
GATTCAGGCAATATCCCCGGACCAGCATTCAGTCTTTCTCAACTCATCAAAAACTTCGACAATAAAGGCCTAAACGAAAAAGACCTCGTTGCCCTATCTGGAGCACACACTATTGGATTT
TCGCGCTGTCTTTTATTTAGAGACCGAATCTACAATGACAAAAACATCGATGCAAACTTCGCAAAACAGCTTCAAGACATTTGTCCCAGAGAAGGCGGAGACTCCAACCTTGCAGCTCTG
GACTGTGTTACACCGGCAAAATTCGATGAGGCATATTACATGGAACTGATTAAAAAGAAAGGGCTTCTTCATTCGGATCAGGAATTATTGAATGGTGATTATACTGGATCGTTGGTTAGA
AAGTATAGGCGCGATACAAGTGCTTTCTACAACGACTTTGCGAAATCTATGATTAAGATGGGAAATATTAAGCCACTTACTGGGAGTCAAGGTGAAATTCGTTCAAATTGCAGGAGAGCC
AATTAA

Retrieve as FASTA