Entry information : MtRboh05 (Medtr8g099030.1[4.0] / Medtr1g143300.1[3.0])
Entry ID | 4162 |
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Creation | 2008-12-31 (Christophe Dunand) |
Last sequence changes | 2014-07-31 (Christophe Dunand) |
Sequence status | complete |
Reviewer | Catherine Mathe |
Last annotation changes | 2016-05-25 (Catherine Mathe) |
Peroxidase information: MtRboh05 (Medtr8g099030.1[4.0] / Medtr1g143300.1[3.0])
Name (synonym) | MtRboh05 (Medtr8g099030.1[4.0] / Medtr1g143300.1[3.0]) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Class | Respiratory burst oxidase homolog [Orthogroup: Rboh002] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Fabaceae Medicago | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Organism | Medicago truncatula (barrel medic) [TaxId: 3880 ] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
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Tissue type | Mixed tissues |
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Inducer | N/D |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4162' 'join(41550432..41551077,41551277..41551436,41551702..41551750,41552435..41552548,41555564..41555986,41556666..41557052,41557153..41557248,41557506..41557621,41558013..41558180,41558285..41558444,41558596..41558793,41558936..41559064,41559185..41559263,41559367..41559476)' |
Exons►
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Literature and cross-references MtRboh05 (Medtr8g099030.1[4.0] / Medtr1g143300.1[3.0])
Literature | VandenBosch,K., Endre,G., Silverstein,K, Town,C.D., Van Aken,S., Utterback,T., Cheung,F. and Fraser,C.M. The Medicago truncatula 6K unigene set: cDNA clones selected and re-arrayed from various libraries |
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DNA ref. | GenBank: CR479630 Phytozome 12: chr8 (41550432..41559476) |
EST ref. | GenBank: CA921657 BG645205.1 [5' end] DY632917.1 [3' end] |
Cluster/Prediction ref. | Phytozome Gene 12: 31075112 |
Omic ref. | Gene atlas: Mtr.30751.1.S1_at |
Protein sequence: MtRboh05 (Medtr8g099030.1[4.0] / Medtr1g143300.1[3.0])
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (chromo 8, 13 introns) and 3 ESTs (BG645212, BG645205, CA921657, DY632917). Cultivar="A17". | ||||||||||||
DNA ► Send to BLAST |
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CDS► Send to BLAST |
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