Entry information : NcPGHS01
| Entry ID | 4180 |
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| Creation | 2007-02-02 (Marcel Zamocky) |
| Last sequence changes | 2007-02-02 (Marcel Zamocky) |
| Sequence status | complete |
| Reviewer | Filippo Passardi |
| Last annotation changes | 2012-04-25 (Catherine Mathe (Scipio)) |
Peroxidase information: NcPGHS01
| Name | NcPGHS01 | ||||||||||||||||||||||||||||||||||||
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| Class | H synthase [Orthogroup: PGHS001] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Fungi Ascomycota Sordariomycetes Sordariaceae Neurospora | ||||||||||||||||||||||||||||||||||||
| Organism | Neurospora crassa [TaxId: 5141 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue type | N/D |
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| Inducer | N/D |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4180' 'join(4631535..4632107,4632271..4632955,4633031..4633728)' |
Exons►
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Literature and cross-references NcPGHS01
| Literature | Galagan,J.E., Calvo,S.E., Borkovich,K.A., Selker,E.U., Read,N.D.,
Jaffe,D., FitzHugh,W., Ma,L.-J., Smirnov,S., Purcell,S., Rehman,B., Elkins,T., Engels,R., Wang,S., Nielsen,C.B., Butler,J., Endrizzi,M., Qui,D., Ianakiev,P., Pedersen,D., Nelson,M., Washburne,M., Selitrennikoff,C.P., Kinsey,J.A., Braun,E.L., Zelter,A., Schulte,U., Kothe,G.O., Jedd,G., Mewes,W., Staben,C., Marcotte,E., Greenberg,D., Roy,A., Foley,K., Naylor,J., Thomann,N., Barrett,R., Gnerre,S., Kamal,M., Kamvysselis,M., Mauceli,E., Bielke,C., Rudd,S., Frishman,D., Krystofova,S., Rasmussen,C., Metzenberg,R.L., Perkins,D.D., Kroken,S., Cogoni,C., Macino,G., Catcheside,D., Li,W., Pratt,R.J., Osmani,S.A., DeSouza,C.C., Glass,L., Orbach,M.J., Berglund,J., Voelker,R., Yarden,O., Plamann,M., Seiler,S., Dunlap,J., Radford,A., Aramayo,R., Natvig,D.O., Alex,L.A., Mannhaupt,G., Ebbole,D.J., Freitag,M., Paulsen,I., Sachs,M.S., Lander,E.S., Nusbaum,C. and Birren,B. "The genome sequence of the filamentous fungus Neurospora crassa." Nature 422 (6934), 859-868 (2003) Zamocky M. et al. "Phylogenetic relationship in the peroxidase-cyclooxygenase superfamily (2007 in preparation). |
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| Protein ref. | UniProtKB_Uniparc: Q7RUD3 |
| DNA ref. | JGI genome: supercont10.3 (4631535..4633728) |
Protein sequence: NcPGHS01
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Softberry predicted 3 exons, proteins with NCBI id: EAA30056.1 and EAA30057.1 are joined together according to softberry prediction (otherwise EAA30056.1 and EAA30057.1 do not completely cover the peroxidase domain!). Original annotation: related to feebly protein (EAA300571.) and hypothetical protein (EAA30056.1). Both partial sequences are found in SwissProt under the accessions Q7RUD3 (EAA30056) and Q7S3N7 (EAA30057). | ||||||||||||
| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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