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Entry information : GmPrx09 (Glyma04g40530.1)
Entry ID 425
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2005-06-21 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx09 (Glyma04g40530.1)
Name (synonym) GmPrx09 (Glyma04g40530.1)
Class Class III peroxidase    [Orthogroup: Prx021]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue types Hypocotyls
Roots
Seedling epicotyls
Inducers Cyst nematode infection
Pathogen interaction
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx09
start..stop		 S start..stop
MtPrx07 577 0 1..327 1..327
GmPrx[P]157 510 0 56..326 1..271
CclPrx110 493 1.3e-177 1..326 3..328
CsPrx21 488 1.9e-175 9..326 11..328
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '425' 'join(46559527..46559739,46559862..46560053,46560138..46560303,46560389..46560801)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 46559527..46559739 211 N° 2 46559862..46560053 190 N° 3 46560138..46560303 164 N° 4 46560389..46560801 411
join(46559527..46559739,46559862..46560053,46560138..46560303,46560389..46560801 )


exon

Literature and cross-references GmPrx09 (Glyma04g40530.1)
Literature Shoemaker et al Public Soybean EST Project. Alkharouf, N.W., Khan,R. and Matthews, B.F. unpublished.
DNA ref. Phytozome 12:   Gm04 (46559527..46560801)
Protein sequence: GmPrx09 (Glyma04g40530.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (303)
PWM (Da):   %s   35517.74 (32665.3)  
PI (pH):   %s   7.67 (6.50) Peptide Signal:   %s   cut: 25 range:25-327
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKPNKLKCITTFFILYLFNQNAHSELQVGYYSYSCSMAEFIVKDE
VRKGVTNNPGIAAGLVRMHFHDCFIRGCDASVLLDSTPLNTAEKDSPANKPSLRGYEVIDNAKAKLEAVCPGIVSCADIVAFAARDSVEFARGLGYDVPAGRRDGRISLASDTRTELPPPTFNVNQLTQLFARKGLTQDEMVTLSG
AHTIGRSHCSAFSSRLYNFSTTSSQDPSLDPSYAALLKRQCPQGSTNQNLVVPMDPSSPGIADVGYYVDILANRGLFTSDQTLLTNAETASQVKQNARDPYLWASQFADAMVKMGQIIVL
KGNAGEIRTNCRVVNS

Retrieve as FASTA  
Remarks Complete sequence from genomic and 10 partial ESTs. No nodulated seedling.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCCAAATAAGCTTAAATGTATAACTACATTTTTTATCCTATATTTGTTCAATCAAAATGCTCATTCTGAGCTGCAGGTTGGGTATTACAGCTATTCATGTAGCATGGCTGAGTTC
ATTGTGAAGGATGAAGTCAGAAAAGGTGTTACTAATAATCCTGGAATTGCAGCTGGGCTAGTAAGAATGCATTTTCATGATTGCTTTATTAGAGAGTAAGTCATTAACTCATTATATGAA
GTCATTTATTATTTATCCATTCCCCTTAAATCTTGGTAGTAAAATTTGGTAATTACCTGTTTTCTGTAGTAAAATTTAACCGCTTTGTTAAATTTAGGGGTGTGATGCATCAGTGCTTCT
TGATTCCACTCCCTTAAACACTGCAGAGAAAGACTCTCCCGCAAATAAACCAAGTCTCCGAGGATATGAAGTCATTGATAATGCCAAGGCTAAACTAGAAGCAGTATGCCCAGGAATTGT
TTCATGCGCTGACATTGTTGCATTTGCAGCAAGGGACAGTGTGGAGTTTTTGTAAGTTTGCCTACTTTGTTCTATAAAGTAGAAACATCTTTGAAAGCAAGAAAATGACCTTGTATTATT
CCTTGCTTCACACAGGCTCGAGGGCTTGGTTATGATGTTCCAGCAGGAAGAAGAGATGGCAGAATCTCACTAGCTTCAGATACAAGAACAGAGTTACCTCCTCCAACTTTCAATGTAAAC
CAACTCACTCAACTCTTTGCAAGAAAGGGATTAACACAAGATGAAATGGTCACCCTTTCAGAGGTATACATTGAGCTTCAACATAACTCTTCTTTATGGTTTTGCTTGTAGCTTAAATTT
GCTAATGGCATGTACATTGTGCATGCAGGAGCACACACCATCGGTCGCTCTCATTGCTCGGCTTTCAGCAGCAGATTATACAACTTCAGTACCACTTCAAGCCAGGATCCAAGTTTAGAT
CCCTCATATGCAGCACTTCTGAAGCGGCAATGTCCACAAGGCAGCACAAACCAAAACTTGGTGGTTCCAATGGACCCTTCAAGTCCTGGAATTGCTGATGTGGGGTACTATGTTGATATA
TTAGCAAACCGAGGCCTCTTCACATCTGACCAAACTCTCTTAACTAATGCTGAAACAGCCAGCCAGGTGAAACAAAATGCCAGGGATCCCTATTTATGGGCAAGTCAATTTGCAGATGCA
ATGGTGAAGATGGGTCAAATCATTGTCTTAAAAGGTAATGCTGGAGAGATTAGAACAAATTGCAGGGTGGTCAATAGTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGCCAAATAAGCTTAAATGTATAACTACATTTTTTATCCTATATTTGTTCAATCAAAATGCTCATTCTGAGCTGCAGGTTGGGTATTACAGCTATTCATGTAGCATGGCTGAGTTC
ATTGTGAAGGATGAAGTCAGAAAAGGTGTTACTAATAATCCTGGAATTGCAGCTGGGCTAGTAAGAATGCATTTTCATGATTGCTTTATTAGAGGGTGTGATGCATCAGTGCTTCTTGAT
TCCACTCCCTTAAACACTGCAGAGAAAGACTCTCCCGCAAATAAACCAAGTCTCCGAGGATATGAAGTCATTGATAATGCCAAGGCTAAACTAGAAGCAGTATGCCCAGGAATTGTTTCA
TGCGCTGACATTGTTGCATTTGCAGCAAGGGACAGTGTGGAGTTTGCTCGAGGGCTTGGTTATGATGTTCCAGCAGGAAGAAGAGATGGCAGAATCTCACTAGCTTCAGATACAAGAACA
GAGTTACCTCCTCCAACTTTCAATGTAAACCAACTCACTCAACTCTTTGCAAGAAAGGGATTAACACAAGATGAAATGGTCACCCTTTCAGGAGCACACACCATCGGTCGCTCTCATTGC
TCGGCTTTCAGCAGCAGATTATACAACTTCAGTACCACTTCAAGCCAGGATCCAAGTTTAGATCCCTCATATGCAGCACTTCTGAAGCGGCAATGTCCACAAGGCAGCACAAACCAAAAC
TTGGTGGTTCCAATGGACCCTTCAAGTCCTGGAATTGCTGATGTGGGGTACTATGTTGATATATTAGCAAACCGAGGCCTCTTCACATCTGACCAAACTCTCTTAACTAATGCTGAAACA
GCCAGCCAGGTGAAACAAAATGCCAGGGATCCCTATTTATGGGCAAGTCAATTTGCAGATGCAATGGTGAAGATGGGTCAAATCATTGTCTTAAAAGGTAATGCTGGAGAGATTAGAACA
AATTGCAGGGTGGTCAATAGTTAG

Retrieve as FASTA