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Entry information : TcasPxt01
Entry ID 4263
Creation 2006-12-28 (Marcel Zamocky)
Last sequence changes 2016-01-22 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-22 (Christophe Dunand)
Peroxidase information: TcasPxt01
Name TcasPxt01
Class Invertebrate peroxinectin    [Orthogroup: Pxt001]
Taxonomy Eukaryota Metazoa Arthropoda Insecta Tenebrionidae Tribolium
Organism Tribolium castaneum    [TaxId: 7070 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TcasPxt01
start..stop		 S start..stop
AmelPxt02 764 0 71..629 92..654
AaePxt03_Liverpool 745 0 71..652 118..704
DmPxt02-A 744 0 34..661 53..688
AaePxt03_Rockfella 739 0 71..652 82..668
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..146 144 N° 2 200..399 198 N° 3 589..765 175 N° 4 818..1014 195
N° 5 1066..1261 194 N° 6 1313..1658 344 N° 7 2070..2226 155 N° 8 2279..2449 169
N° 9 2506..2698 191 N° 10 2748..2853 104 N° 11 2923..3055 131  
join(1..146,200..399,589..765,818..1014,1066..1261,1313..1658,2070..2226,2279..2 449,2506..2698,2748..2853,2923..3055)


exon

Literature and cross-references TcasPxt01
Literature Kim,H.S et al., BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Nucleic Acids Res. 38 (DATABASE ISSUE), D437-D442 (2010)
Protein ref. GenBank:   XP_967241.1
DNA ref. GenBank:   NW_001092786.1 (49570..52624)
Protein sequence: TcasPxt01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   673 (660)
PWM (Da):   %s   75793.43 (74220.6)  
PI (pH):   %s   5.63 (5.54) Peptide Signal:   %s   cut: 14 range:14-673
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MWYFLALLHLTLAEPKGSGYSIFLEHTPSWDRRPYGYGPAAPVAF
DPFNNNNFLPQPQPQPPTPDPATLGCGTPPAGCPKSRYRSYDGSCNNLGNPILGTPQTRYARLLPANYAGVSTPTASVTGKPLPGSRIVSLLIYPDVQIEDPKFTINAMQYGQIITHDMSMIA
GSTQAQPHQTKCCTADGQLLEFANIPEHCFPIVLPNDDPAHSQTNAKCMNFVRTITDRDRNCVGGSQPAELTAVNHYLDLSIVYGNSDQINQQVRQFQGGRLRVEVRDGKEWLPRSTNAS
GVCSIQSPQEVCYLAGDARVNQNPQLTILQIILMREHNRIADALAKLNPHWDDETIFQEARRIAIAEHQFISYYEWLPIFIGIENSLKNKIIYLSKHFINDYRQEVDPTVLNEHATAAFR
YFHSLIAGHLDLVNEHRSSYGNLRLSDWFNRPAIVEQGDNFDELTRGLATQPELASDPYHDSEITQFLFRDGQQFGSDLKAIDIQRNRDHGLASYNEYRGFCGLPRAHSFEDFLDVMTQN
VKKLATLYESPDDVDLTVGGSLEAHVPGTLSGPTFLCILTEQFYRTRVGDRFWFENQHNGFTLAQLNAIRKTSISRLLCDNGHHIQAMQPRGFERISHDNPITPCENLPAVDLTLWKEVP
FGVERPYDFGSDFSDEFFWKKK

Retrieve as FASTA  
Remarks Complete sequence from genomic and 3 ESTs. Original annotation PREDICTED: similar to Peroxidase precursor (DmPO)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGGTACTTCCTGGCCCTTCTCCACTTGACCTTAGCTGAACCCAAAGGCTCGGGTTATAGCATTTTCCTCGAACACACGCCAAGTTGGGACAGGAGACCTTACGGTTACGGACCTGCG
GCACCAGTGGCCTTTGACCCTTTCAAAAGTACTACCCTCCAATACCCCAAAAAACGCACTTTATACAAATACTCTTTGTAGCAATAACAATTTCTTGCCACAACCACAACCACAACCCCC
AACACCCGATCCGGCAACCTTAGGCTGTGGTACCCCACCAGCAGGGTGCCCCAAATCGAGGTACCGCTCCTACGATGGTTCCTGTAATAACTTAGGGAACCCAATTTTGGGTACTCCACA
GACACGATACGCGAGGCTTCTACCGGCGAATTACGCCGATGTGGTAAGTAATTTAAAATGTTGGTAAGGGGTGCACTAATTTAACAGAAAAAGTCAGTCTGTTTTGAGAAAAAACAATTA
GCTGACAAAATCAATATGAATGTTTCAGAAAAATCGGTTTTACACCACAAAAATAATAAAATGTTTGTGAACACTGGTTATTTTTCTAACTTCGTTGGTTGTTTTTTTTTAGGGGTGAGC
ACCCCCACAGCTTCAGTAACGGGAAAACCGCTCCCAGGCTCTCGAATAGTCAGTCTTTTGATTTATCCCGATGTACAAATTGAAGATCCCAAATTTACAATTAATGCCATGCAATATGGG
CAAATAATCACCCATGATATGAGCATGATTGCGGGAAGTACCCAAGCACACGTAAGTGTCGCTTTTTTTCCAACTTGTTGAGTGTTGTAAATGAGTGTTTTAGAGCCCCATCAGACCAAG
TGTTGTACGGCCGATGGTCAATTGCTCGAGTTTGCCAACATACCGGAACATTGTTTCCCTATAGTGTTGCCCAACGATGACCCCGCTCACTCCCAGACGAATGCAAAGTGCATGAATTTT
GTAAGAACGATCACTGATCGTGATCGCAACTGTGTTGGAGGCTCACAACCGGCTGAACAAAAGTACTTAATTTTATTTTCCACTTAACCTATCATGCAATCATATTTTAACAGTTAACTG
CAGTTAACCATTACTTGGACTTATCGATAGTTTACGGTAACAGCGACCAAATCAACCAACAAGTCCGGCAATTCCAAGGCGGAAGACTTAGAGTTGAAGTACGAGATGGGAAAGAATGGT
TACCGAGGAGTACTAACGCTAGTGGCGTTTGTTCTATTCAAAGCCCACAAGAAGTTTGCTATTTAGCTGTGGTAAGTAACAACACGCAGTAATTATTTCATTAAAATTATTACTACGTTC
AGGGGACGCTCGAGTCAACCAAAACCCACAATTGACAATCCTTCAAATCATTCTTATGAGAGAACACAATCGAATTGCTGACGCTTTGGCCAAATTGAATCCACATTGGGACGACGAAAC
TATTTTCCAGGAAGCTAGAAGAATTGCAATCGCCGAACACCAATTTATTTCATACTACGAATGGTTGCCGATTTTCATTGGAATTGAAAATTCGCTCAAGAACAAAATTATCTATTTGAG
CAAACATTTTATCAACGATTATCGACAAGAAGTTGACCCGACGGTGCTTAACGAACACGCAACGGCCGCTTTCAGATATTTCCATTCGCTAATTGCAGGGCATTTGGAGAGTAAGAGCAC
TTTTTTCTATATTTTTATGAATAATAAATTACGTAACATTTATACGTGAAAAAAACCAACTGAAAACAGAAAGAAATTTGAGATTTGAATGTGTTAAATAATAAACAGCATGACCTGAGG
TGACCTGAGCTGACACTATTTGACAATCGACAAAAGTAATTTTTTACAATTTTCTGGTAAAATAAAAACATCCATCAAAATAAGCAAAATTTCGCCATTTTTACATCTAACATTATTCTA
CAACAATAAAAATATTCTCTAAAAAAATTTTATGTAATTCGCACAAATTGAGCAATTTTTTTATTAAGGGCCGATAATAATTCGAAGAAGCAATTAGATATAATTACAAAAAATTCAAAC
TTGATTTGTGATTTTCTGTATCGCCAAATAAACATTTTCAGTTTGGTAAACGAGCACCGCAGCAGCTACGGCAACTTGCGTCTCAGTGATTGGTTTAACCGTCCTGCTATTGTCGAACAG
GGCGACAATTTCGATGAATTGACTCGAGGTTTGGCCACTCAGCCGGAACTCGCTTCTGATCCTTACCATGACAGTGAGAGGTAAAGTCGTAGCAATAACCGTGAAACCCAGATTACAATG
CACATTTTTCAGATAACACAGTTTTTGTTCCGAGACGGACAACAATTCGGTTCGGATTTGAAAGCCATTGATATCCAACGTAATCGCGACCATGGACTTGCCTCCTATAACGAATATCGA
GGTTTTTGTGGATTGCCCAGAGCCCACAGTTTTGAAGATTTCCTCGATGTTATGACACAAGACACGTGAGACAATAATTAATAATGTAATTGAAATGTAGTAATTTTTTTTTGATTGTCA
GAATGTGAAAAAATTGGCGACACTGTACGAAAGTCCCGACGATGTTGATTTAACAGTTGGTGGTTCGTTGGAAGCCCATGTTCCGGGTACTTTATCAGGACCAACATTCTTGTGTATTTT
GACTGAACAGTTCTATAGAACTCGAGTTGGGGATAGGTTTTGGTTCGAGAATCAACACAACGGATTCACTTTAGAGGTTAGTTGTTAAAGTAACCCAATTAAAAATAATTCAAACGTAAT
TACAGCACAATTAAACGCAATTCGTAAAACGAGCATTTCGAGATTATTATGCGACAATGGCCATCACATCCAAGCCATGCAACCAAGAGGCTTTGAAAGAATATCTCACGAGAGTACGTA
GTTTTTTTTTTCTTCTTACATCATAATTAGTGTGAATTTGATTGATGAGAGAATTATTTTAGTAATCCGATTACACCGTGCGAAAATTTGCCAGCTGTTGATCTCACTTTGTGGAAGGAA
GTTCCGTTTGGTGTCGAACGTCCGTACGATTTCGGGTCGGACTTTTCCGATGAATTCTTTTGGAAGAAGAAATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTGGTACTTCCTGGCCCTTCTCCACTTGACCTTAGCTGAACCCAAAGGCTCGGGTTATAGCATTTTCCTCGAACACACGCCAAGTTGGGACAGGAGACCTTACGGTTACGGACCTGCG
GCACCAGTGGCCTTTGACCCTTTCAACAATAACAATTTCTTGCCACAACCACAACCACAACCCCCAACACCCGATCCGGCAACCTTAGGCTGTGGTACCCCACCAGCAGGGTGCCCCAAA
TCGAGGTACCGCTCCTACGATGGTTCCTGTAATAACTTAGGGAACCCAATTTTGGGTACTCCACAGACACGATACGCGAGGCTTCTACCGGCGAATTACGCCGATGGGGTGAGCACCCCC
ACAGCTTCAGTAACGGGAAAACCGCTCCCAGGCTCTCGAATAGTCAGTCTTTTGATTTATCCCGATGTACAAATTGAAGATCCCAAATTTACAATTAATGCCATGCAATATGGGCAAATA
ATCACCCATGATATGAGCATGATTGCGGGAAGTACCCAAGCACAGCCCCATCAGACCAAGTGTTGTACGGCCGATGGTCAATTGCTCGAGTTTGCCAACATACCGGAACATTGTTTCCCT
ATAGTGTTGCCCAACGATGACCCCGCTCACTCCCAGACGAATGCAAAGTGCATGAATTTTGTAAGAACGATCACTGATCGTGATCGCAACTGTGTTGGAGGCTCACAACCGGCTGAACAA
TTAACTGCAGTTAACCATTACTTGGACTTATCGATAGTTTACGGTAACAGCGACCAAATCAACCAACAAGTCCGGCAATTCCAAGGCGGAAGACTTAGAGTTGAAGTACGAGATGGGAAA
GAATGGTTACCGAGGAGTACTAACGCTAGTGGCGTTTGTTCTATTCAAAGCCCACAAGAAGTTTGCTATTTAGCTGGGGACGCTCGAGTCAACCAAAACCCACAATTGACAATCCTTCAA
ATCATTCTTATGAGAGAACACAATCGAATTGCTGACGCTTTGGCCAAATTGAATCCACATTGGGACGACGAAACTATTTTCCAGGAAGCTAGAAGAATTGCAATCGCCGAACACCAATTT
ATTTCATACTACGAATGGTTGCCGATTTTCATTGGAATTGAAAATTCGCTCAAGAACAAAATTATCTATTTGAGCAAACATTTTATCAACGATTATCGACAAGAAGTTGACCCGACGGTG
CTTAACGAACACGCAACGGCCGCTTTCAGATATTTCCATTCGCTAATTGCAGGGCATTTGGATTTGGTAAACGAGCACCGCAGCAGCTACGGCAACTTGCGTCTCAGTGATTGGTTTAAC
CGTCCTGCTATTGTCGAACAGGGCGACAATTTCGATGAATTGACTCGAGGTTTGGCCACTCAGCCGGAACTCGCTTCTGATCCTTACCATGACAGTGAGATAACACAGTTTTTGTTCCGA
GACGGACAACAATTCGGTTCGGATTTGAAAGCCATTGATATCCAACGTAATCGCGACCATGGACTTGCCTCCTATAACGAATATCGAGGTTTTTGTGGATTGCCCAGAGCCCACAGTTTT
GAAGATTTCCTCGATGTTATGACACAAGACAATGTGAAAAAATTGGCGACACTGTACGAAAGTCCCGACGATGTTGATTTAACAGTTGGTGGTTCGTTGGAAGCCCATGTTCCGGGTACT
TTATCAGGACCAACATTCTTGTGTATTTTGACTGAACAGTTCTATAGAACTCGAGTTGGGGATAGGTTTTGGTTCGAGAATCAACACAACGGATTCACTTTAGCACAATTAAACGCAATT
CGTAAAACGAGCATTTCGAGATTATTATGCGACAATGGCCATCACATCCAAGCCATGCAACCAAGAGGCTTTGAAAGAATATCTCACGATAATCCGATTACACCGTGCGAAAATTTGCCA
GCTGTTGATCTCACTTTGTGGAAGGAAGTTCCGTTTGGTGTCGAACGTCCGTACGATTTCGGGTCGGACTTTTCCGATGAATTCTTTTGGAAGAAGAAATAA

Retrieve as FASTA