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Entry information : CbrPxt03
Entry ID 4281
Creation 2006-12-29 (Christophe Dunand)
Last sequence changes 2006-12-29 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-05-05 (Christophe Dunand)
Peroxidase information: CbrPxt03
Name CbrPxt03
Class Invertebrate peroxinectin    [Orthogroup: Pxt001]
Taxonomy Eukaryota Metazoa Chromadorea Rhabditidae Caenorhabditis
Organism Caenorhabditis briggsae    [TaxId: 6238 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CbrPxt03
start..stop		 S start..stop
CelPxt03 2040 0 5..1208 4..1208
CelPxt02 753 0 83..1205 147..1397
CelPxt02 270 3.8e-74 588..1207 88..682
CelPxt02 143 1.26e-34 75..567 826..1437
CbrPxt02 744 0 83..1205 148..1398
CbrPxt02 271 1.58e-74 656..1207 156..683
CelPxt01 693 0 82..1205 63..1339
CelPxt01 312 3.75e-88 662..1207 77..625
CelPxt01 158 2.69e-39 78..547 771..1360
Literature and cross-references CbrPxt03
Literature Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R., Waterston R.H. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. PLoS Biol. 1:166-192(2003).
Protein ref. UniProtKB:   A8X403
DNA ref. GenBank:   CAAC02000473.1 (989389..993578)
Protein sequence: CbrPxt03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1208 (1189)
PWM (Da):   %s   136218.81 (134109.6) Transmb domain:   %s   o364-386i445-464o500-522i545-567o577-591i727-744o
PI (pH):   %s   6.56 (6.56) Peptide Signal:   %s   cut: 20 range:20-1208
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MIRIFFLLLF VSSSLVADGR QYFNDKVQRA FQQAESEILS FRPHSDFSQE SSLMINYSIA ALAAIKISQT NRDNDGNLPH RLCPLKKYKC SYGKYRHFDG RCTNIFSPLS GSAFSPFSRR  LKANYDDDIS LPRFHGFRNK LLPQVEIIEK QIAKVAASFP IPLTSTFLDF SDFLYNDLAK FVKLQEGLGC CGIGRSGECV SIGEHLLDCY IRSAAAPYNH CSLGQREQMN LATAFIDGGP  IYQDLKDLTK AKITSTVTLD SKSSIYNLLI DEHNWVVNQI QTAFPDMSVE LVFEEARKFV IAEIQHIAFE HFLPIVLGEE TMEKYDLRAS HCDGGACHEV DANTLNEYGS AVGLFYKYMT  APDKIFNPSH YSTSEFSTST STTTSSSSTF IEILMKGRDH GIPTYSEWRK ECGGGKLESY EQLIGLIDDR VLKSVRDLFP DIRDVDLIIL GIAENPVYGS LLGPTFGCIM ALQFQKTKFG  DSYWYTNKLN NEQLEEVQKA SISSLICRHQ KASIIQKDGF RAADNFQNIP IFCNSSVFTW PDFSKWVSAP EKQKNTQFDV ILGECIQEVS AARNRQKSEV LQDGLHNSVA LKSYGSMMLA  KDEAVYEANV SFILLEATRK LVKLQNIELD SIQGVYIGED FGVKSDTQCN PKDFPCDPTN PYRSYTGWCN NLESPSLANT FRELKRLLPP VYEDGINLPR SKTTTGSRLP SPRAISNVVH  HAKKLEHAKY SHFVMEFGQF IDHDITHSPV DQNTDGTPLN CSRCDSNRSV SPSCFPIPVL ATDLHFEPFS CLSFVRSLPS QKALGYRNQM NQVSAYLDGS VMYGSTKCEG DRLRTFQDGK  MKTTQISKSR RHYGITLSQS DESEQDGCVS SPDSPCFIAG DDRNSQQALL IAVHTVFHRE HERLTSLFKK VNPHWEDERI YQETRKLISA EFAHIVYNEY LPIIVGQKMM DDYDLRPRQE  GYYKGYENCD ASILQPFATA AFRFGHSTVT RFTPMQETVL SPATRVVDLA SDFLNMSKIY NNEAVEQILG GMHGRHQMMT DRFVDDSVRN FLFSDRGRRG TGLDLIAINI QRGRDHGIPP  YNQYRSFCGL SRLTSFYSIF SDIDQDGLTA IGNVYESPDD IDLFTGIVSE KVIPGGIVGP TASCIIAEQF RRLKKCDRFY YENGKDYSKF TVEQLKEIRK VTMSSLICAN TKVPKIAKDV 
FSVPDPFR 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2). Strain="AF16". Contain two peroxidase domains.