View Redoxidase 4358

Entry information : At2CysPrx01 (At3g11630 / BAS1 / At2CysPrxA)

Entry ID	4358
Creation	2007-01-18 (Christophe Dunand)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-12 (Achraf Jemmat)

Peroxidase information: At2CysPrx01 (At3g11630 / BAS1 / At2CysPrxA)

Name (synonym)

At2CysPrx01 (At3g11630 / BAS1 / At2CysPrxA)

Class

Typical 2-Cysteine peroxiredoxin [Orthogroup: 2CysPrx001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue types

Buds
Inflorescences
Mixed tissues
Seeds
Siliques
Stems
Whole plant

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	At2CysPrx01 start..stop	S start..stop
So2CysPrx	525	0	1..266	1..265
Aly2CysPrx01	524	0	1..266	1..265
Bn2CysPrxB-2_other	442	1.2e-159	1..266	1..262
Br2CysPrx02_other	437	1.89e-157	1..266	1..268

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4358' 'join(3672189..3672395,3672779..3672853,3673015..3673096,3673192..3673271,3673396..3673521,3673616..3673729,3673821..3673937)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	3672189..3672395	205	N° 2	3672779..3672853	73	N° 3	3673015..3673096	80	N° 4	3673192..3673271	78
N° 5	3673396..3673521	124	N° 6	3673616..3673729	112	N° 7	3673821..3673937	115
join(3672189..3672395,3672779..3672853,3673015..3673096,3673192..3673271,3673396 ..3673521,3673616..3673729,3673821..3673937)

Literature and cross-references At2CysPrx01 (At3g11630 / BAS1 / At2CysPrxA)

Literature	Baier M., Dietz K.-J. 2-Cys peroxiredoxin bas1 from Arabidopsis thaliana.
Protein ref.	UniProtKB: Q96291 Q8L5U1 [Mismatch]
DNA ref.	Phytozome 12: Chr3 (3672189..3673937)
Cluster/Prediction ref.	Phytozome Gene 12: 19661864 UniGene: At.22950
Omic ref.	ePlant: At3g11630 TAIR: At3g11630

Protein sequence: At2CysPrx01 (At3g11630 / BAS1 / At2CysPrxA)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	266
PWM (Da):	29073.96
PI (pH):	7.57

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASVASSTTLISSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGFARRSSLSSTSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCP
TEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEV
CPAGWKPGEKSMKPDPKLSKEYFSAI*

Retrieve as FASTA

Remarks

Complete sequence from genomic, 9 cDNA and 166 ESTs. Two TREMBL accessions Q96291 and Q8L5U1 (3 mismatches).

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AATGGCCATC TTCAAGTCTT TATACAACTA GGTTCAAGTG TAAAACCCAA GAAAATCAGT GAATATGAGA TAATCAATAC CTGCCTCAAG TGAGTGCAGG TAGCTTGAAC AGCAGTATCA GACCATGAAG CTCCAATGGA TTTAGATACA AGCAGCCGTG CAGCTGACAT AGGTAAAAGT CTCAGCGATG CAATCAGAAA ACTTGCTGTA GCCGACAGAA CAGAAGACCT GCACAACATG ATAACGATTT CACAACATTC TAAATAAAGA CTGATTGGTT CTTTCCTATC GAGGATTCGT ATTGAGAACA AAAGCTCACG CTGCAAGTTT GCCAATTAAT GATTGCTTTG TTGATTGTTG GTTCAAAGTC AAAAATGGAT ATAGGCCAAT GCAATATACC ACCTGCAAAG CATTCCAGAG AATAATATAA GAAAAATCAC ATAGCACTGA AAGAAATTGT GATGGAGAAA GTACTACTCT TAGAGGAAGC CATCTATACC TTGTCCGAGA ATTTCTTCAA TAACTCAAGG GATATATAAG ACCCAATAGA ATGCCCAACC TACCAAGATC AATTAAGCTT AGAGTTGTAA ATTTTCATGA AAATCTGGAA ATCCATCCAA CTAATGGACA TATATATTTT GGTCATAAGA AGCAATATGT CAATGGCTTA TACACATGAC AGTCTTACCA ATATTATTGG AACTTTCACA CTCTCCAACT CCTGTCTGAT AAAATCAATC TGTATGATAA CTAACAGATT AAGATCTTAA CTTCACAGGA TGAACAATAC AAGAACCTAA AGGCTTTCAA ATCCAAGAGC AATGAAGAAA AATGATTTTT ATTACCTTAT GATCAATTTG TTCTTGAAAT GAAAATAGCC TCCCAGACTC CCAGTCCTAA AAGTGAAAAT AATCAAGTAT CATGAAAGCC TATCAAACTA AGATATTATA TGAAGAGAAC CATCAAAGTT TACACACAGT AAAACCTGAA ACCAAAGTTA ACGTACCTTG CTCGTGTGAG ATATTTGCCC AATAGCTACA CAAATAAAAC AAACCACTCC ACCATTAGAG ATCAGAAGAA CAAACTCAAA CTCAGAAATA AACAGCTTCC ATCTTAAGGA CTCAAAGAAA TCAAACTCGA AAAGTAGAGC AGCCATACCA ATTACAGAAG CATTTCCACC AAGAAACTCG TATAAAGATT CCAAAAAGTC CTTGTAAAAT GACACAACTC CTGAAAAATT ACAAGCCAAT GTATGAAGCA CACTAGTATA TACACGTGCA TGCATAAGAG TCTTGAGCAT AATAATGAAA CCTGGATTTC CCGGAATAAA CAATACATGG AATGTGGGAT TCTCAGCTTG AATTTCCATC ATCTCCGTCA TCGAACTTTG ATCACAAATA CAAAAAACAA AACAAAAAGT GTAACTATAG TCAAAGAAAT TAGAAAATTT CGTAAAAGAT TAATGTAACA ATACCCAGAA ACTCTGCACA ATCTGGATTT AACATGTCTT TTAGTTTCAT TCATCAATTT GTTTTGAGTC TCCATGTCTC CGGTCACGCG ATTCAACTTA TATCTTCTCT CAGAACTGTC AACACTTGAA AGGAGAAGAT CGAGAGAATT AATGAGACAA CAGAGAAACC ACTAAAAATC AAAACTTTGC AAAATAAGTG AAGAAGCCTT TTAAAGTAAA CCAAGTGAAG AGAGCACAAC AATGCACCTG AAACAACAGG AGTAGATTAG ATACTTTGGA GAACTGAACC ACCGATCGGA GGAAGAAAGT AACGGAGAGA CGGAGTTACC CAAGGTAGAA GAAGAAGACG CATATTTGCA GCAATAGTAA TACGACCTCG TTTTGAGTAA CGCGACGTCG TTTTATGAGT TTGGGTGTCG TCAGGCTTAT CTCCACCTCA TACTTCCACT
ACAAAGAGAG GTGATTGACA GATAGATAAG AGTGTTTGGT AGCTCAGACT CAGAGAGTCA CAAAGTGTGT GTAGCAGCA

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AAACTCTACT ATGATAGCAA AAAGGTACAA TCTTTGTTAT ATGTGAGCAG AGTTTTTTTT CTTGTACGCT AAAACAATCC TTTGTTTGAT TCTCACTTTG TCCCCAAAAT TATAATAAAA AACTTTTTCC GTTAATGGAA GTCTTATTGT GTTACGCCTA CAAATTCATA TTCAGTTGAT CACTTACCTA AGCATGTACA CTGTACATAT TAATGGTAAA AATCAAGACC ATTTTGTGAT CTTCTTTGAT AGCACAGAGA AGCCATTGTT CTACCATATA CGCTAGTCAT ATTAAAGGAC CTGTAAAAAA ACCAAAGGAC AGAAATTATA AAACTATCAT TTCTCTTTCT TTAATGCATC TATATGATAA TTATGATCCT TAAAAAGCTG ATGCTACCTG TAAAAAAGTT GCTCATGTGT CCCCCTGCCA ACAAATTCCA ACATCATTAA TCATCATCAA CCCAACCTCC TCCGTCAACT GATGACCGGT AAACGCCGGT CAACTCTCCT GCTTTAACTA CACTACGTCC CGGTCATTAT TTTTTCACAC TCTCTCTCAA ACGATGCATG CCCTCACCAA CTCCGGCGCC GTACTTCTCG CCGTGTTACT CTTCTTTCTG CTCATCCTTT TCGCCGAGCT CTCTTACATC TTTTGTTGCC GCACCGGATC TTTACCGTCT CCGGCAAGTA AAGAGGTTCT TTTCCAATTC TTGATGTGTT GCAAGAAGAA TCACCACCAC TCTCGTATTG AGCCATGCAC CGGTATTGTT TCTGTACAGA TGGAGGAGGA TGTTGTTGCT GCGGCGGTGC CTGAGGAGGA ATTCGCGGCG GCGGACAAGT GGCGGGTGTC GAGGCTTCTC TTCACAATTG AAGAAGAGGA TTTGGAACTG GAAGATGATG ATGATGATGT GATCTCTGCG GAGGTAGATA ATGGCTTCGA AGTCCAAGTT GATATTCCGG
TGGAGTATTC CGGCGATCCA ACTCCGTTCT TGACGCCGTG

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTCTGTTGCTTCTTCAACTACTCTCATCTCTTCTCCCTCTTCTAGGGTTTTTCCAGCAAAGTCTTCACTTTCCTCTCCATCTGTTTCTTTCCTTCGAACCCTTTCTTCTCCTTCC
GCATCTGCTTCTCTCCGCTCCGGATTTGCTCGACGCTCTTCCCTCAGCTCCACTTCTCGTCGGAGCTTTGCTGTCAAAGCCCAGGCCCCGTAAGTTTATCTAAATGTCGATACTTTTCTT
ATTCGATGTCATTGAAATCTGAATTCATTAGCCTGTTATAGATTTCACTCTCTTCCTACTTGTTAGCCCTATAGGTTTTGGGGAAATAGTTAACGATTTATAGGTTATGCGACCGTGTTT
CTGCAGATTACTCGAAAAGTTCAGAAATTTGAGTGACATTTTCGTTTAGGGTTGTTAATTTCTCTGGTGAAGTGAAATTGAGTGACATATGAGCTATACTCATTGACTGATTAGTATGTT
CGGATGAGGTCTATGTAGTTTTGGTATAGTACCATGGTTATCTGATTGTCAATTTGACTGATCTTTCTCCTTAGATTTGATGTGTTAACGAGTTTTAATTTGGTGATTATAGGATGATCT
TCCACTGGTTGGAAACAAGGCGCCTGATTTTGAGGCAGAGGCTGTGTTTGATCAAGAGTTCATCAAGAGGTACTTACAGCAGTTATCAATCACAGTTGCTGCTTCTAGTTAATCTGAGAT
TAAGTTTAGTTTTGAAGCTGAATGAGTAGTCTTTAGTGTTTTTTATTTAGTGAGTATATGTCTTATTGTGATTGGAAACTAATTGGTAACTGATGAATGTATGGTTTCAGGTTAAGCTCT
CTGATTACATTGGAAAGAAGTATGTGATTCTCTTTTTCTACCCATTGGACTTTACTTTCGTCTGCCCAACAGAGGTTAGCATTGCTCGAGAAGTATATCAAAATTGAATATCCAAGGTTC
CCTCATCCTTGAGTCCTAATCTTTCTCATTTTTTCCTTATGTCTTTTAGAGATTACTGCCTTCAGTGACCGGCATTCAGAATTTGAGAAGTTGAACACCGAAGTATTAGGTGTTTCTGTC
GATAGTGTGTGGTAAGTATCACTATACATTTACTATGTTCTCATTTTACTCAGTTCCTCATCCTTGGTTGACATCACCATGTTCTTATCTGTTTGCAAATTTTTGATTCATTCTTATTTC
TGTGTGTCCTCGTAGTTCTCTCACCTTGCATGGGTCCAAACAGACAGGAAATCTGGAGGGCTTGGTGATCTGAACTATCCCCTTATTTCAGATGTCACTAAATCAATCTCAAAGTCGTTC
GGAGTGCTCATCCATGATCAGAGGTAATTGTTAGCCTTTAAATCTTGGCTACCTTCCTTTAAACTTTCGAAGTGTTTGGGATAAATGAAAACAAGAACTTTGTTTGTGTAAGAACAGGGA
ATAGCACTGAGAGGACTTTTCATAATCGACAAGGAAGGAGTGATCCAACATTCCACCATCAACAATCTTGGTATTGGCCGAAGCGTTGATGAGACAATGAGAACCCTCCAGAGGTAAAGA
TACAAATAAATACACACAACTCCAAAAACCGCTCTTTCCTTTCACTCGATTTCCGGTATGCTTAATACGTTTTCAATGTTGCAGGCATTACAGTACATCCAGGAAAACCCGGATGAAGTC
TGCCCAGCAGGATGGAAGCCGGGTGAGAAGTCAATGAAACCCGACCCAAAACTCAGCAAAGAGTACTTCTCAGCTATTTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GTGATTGACA GATAGATAAG AGTGTTTGGT AGCTCAGACT CAGAGAGTCA CAAAGTGTGT GTAGCAGCAA TGGCGTCTGT TGCTTCTTCA ACTACTCTCA TCTCTTCTCC CTCTTCTAGG GTTTTTCCAG CAAAGTCTTC ACTTTCCTCT CCATCTGTTT CTTTCCTTCG AACCCTTTCT TCTCCTTCCG CATCTGCTTC TCTCCGCTCC GGATTTGCTC GACGCTCTTC CCTCAGCTCC ACTTCTCGTC GGAGCTTTGC TGTCAAAGCC CAGGCCGATG ATCTTCCACT GGTTGGAAAC AAGGCGCCTG ATTTTGAGGC AGAGGCTGTG TTTGATCAAG AGTTCATCAA GGTTAAGCTC TCTGATTACA TTGGAAAGAA GTATGTGATT CTCTTTTTCT ACCCATTGGA CTTTACTTTC GTCTGCCCAA CAGAGATTAC TGCCTTCAGT GACCGGCATT CAGAATTTGA GAAGTTGAAC ACCGAAGTAT TAGGTGTTTC TGTCGATAGT GTGTTCTCTC ACCTTGCATG GGTCCAAACA GACAGGAAAT CTGGAGGGCT TGGTGATCTG AACTATCCCC TTATTTCAGA TGTCACTAAA TCAATCTCAA AGTCGTTCGG AGTGCTCATC CATGATCAGG GAATAGCACT GAGAGGACTT TTCATAATCG ACAAGGAAGG AGTGATCCAA CATTCCACCA TCAACAATCT TGGTATTGGC CGAAGCGTTG ATGAGACAAT GAGAACCCTC CAGGCATTAC AGTACATCCA GGAAAACCCG GATGAAGTCT GCCCAGCAGG ATGGAAGCCG GGTGAGAAGT CAATGAAACC CGACCCAAAA CTCAGCAAAG AGTACTTCTC AGCTATTTAG AAACTCTACT ATGATAGCAA AAAGGTACAA TCTTTGTTAT ATGTGAGCAG AGTTTTTTTT CTTGTACGCT AAAACAATCC TTTGTTTGAT
TCTCACTTTG TCCCCAAAAT TATAATAAAA AACTTTTTCC GTTAATGG

Retrieve as FASTA