Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
273 |
PWM (Da): |
29648.16 |
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PI (pH): |
5.41 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MSMASIASSSSTTLLSSSRVLLPSKSSLLSPTVSFPRIIPSSSASSSSLCSGFSSLGSLTTNRSASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPL DFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYVQ ENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (6 introns), 9 cDNA and 86 ESTs. Four SwissProt/TREMBL accessions: Q9FED5, Q9FNH9, Q9C5R8 (1 mismatch), Q8LEA5 (1 mismatch). |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGGCTAAGAT TGAACACATG TTTGGTGAAA ATTAGCAATC AGAGTTGTTT TATTCGTCTT TTCAAAGTTG GAGCAGAGTT GTTATTTTTA GCCAAAGAAC CTTTGTATCT ATCTCATCTT
TCTCCTGTTT CTGCTATGTG ATTCTCCTTA AATTGAATCA AAAATAAAGA AATCCTTCTT TTCTTTTGCC AATATTTATG TCTTTCACTT GTGTAAATAG TTTATAATAA TGCAAAGAGG
CAGAGTATTT TGACCATTGC AAAAAATAAA TTAGAAAAAT ATCATGTGAG GTCACAGCTC CCTGGAATTA GATAACTATC TGATTGATTT GTTTAATAAA CTTGAGTGCT CATTAAGCTA
ATCTCCATCT GTAGCCGACA ACAAAATTAT GTTGTGGTAT TACTCGGAAT ATTCTCCACT CGGATTAATT AAAAAATATC GTACATGATA ATTTTCTGGT TAAATAAAAA TCTGATACCT
TTGACACGAG AAAAAAGTTA AAAACTAGAA GTTATGGATA AAATCAGAAA ATAACCAAAA GAAAAGGATC GTTTTGTCAT TTCTTGAAAA TAGCCCTATC CTTTTTTTCC ATTAAACCAA
AATGTACAAA GACAAGTGGG GAGTGATAGG GTTTGGTATA TACGCGGTTA GCAGTTACCC ACATGGTTTA TCCACTTCAC ACATTTAAAC CACCCCTACA AAATAATGTT TATCAAAACG
ACCCCAATAC TTTCTTTTGT CTTCTTTCCG CCCTTACCTT CTGATGTTAA ACAACTTAAT TTCCGCTGTA CACTGCTTTT ACCAAAAAAT AAACTCCCCA TAATACATCC TTACGTAGCG
GTAGCTACCT CCGAACCCGG TACATAACTT ATCCGGTCCA CTTCATCCCA AACCAATTTT GATGTTATCT CATCAAACTC CGGTTCATAT TCCTATAACA TCATTTTTAG AGTACGTACC
ATCAACAAAT GAACCATGTA TCGAATGTCT TATATTGGCA
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCAATGGCGTCTATAGCTTCTTCTTCTTCCACCACCCTACTCTCTTCCTCTAGGGTTCTTCTTCCCTCCAAGTCTTCTCTTTTATCTCCTACCGTCTCTTTCCCCAGAATCATACCC TCTTCCTCGGCATCATCCTCTTCTCTCTGTTCCGGGTTCTCCAGTCTCGGTTCCCTCACCACCAACCGCTCCGCCTCACGCCGGAACTTCGCCGTCAAGGCTCAGGCTCTGTAAGTTGAC TCGCAATGCCATAAATTTCTTGTATTTGCTCCATCTTCTCATTCACTATGATTGTTGTATGAATTCGTTAGCTTGTTATAATGGGATCCGTACTATTTTCCTGCTTCTTATCTCTTAAGG GTTTTGAGATCATTGGATAAAAGACTAAACTTTAAACTTTTTAGAGTTCTGCGATTTGAATTGAGCGACATTTTTGTTACCCTTCTTTCGGGTTTAATTAGGGATGGGAGGAAATGATCT GAAATTAATTAATATGATTCACATTTGGCTCATACACAGAAATCTTTTGAGCCCTGCATAGATAGTGAACACCAGTTAAAGAACATTTTGTGTGGTTAAACAATTCGATGATCGATGACT GACTAGTGTTTATATGTTTTATGAATGCAGGATGATTTACCACTGGTCGGTAATAAGGCGCCTGATTTTGAAGCTGAGGCAGTTTTTGATCAAGAGTTCATAAAGAGGTACTTTCATTCC ATTCAAACCTTATTTAACATGTTAGTTAGTTAAGTGTCATAAGCTAAGGTCAATGCAGTAGAGCAATGTTCTGATAGTAATCGACCTATGAATCATGGTTTCAGGTGAAGCTCTCTGAGT ACATTGGCAAAAAGTATGTTATTCTATTCTTCTACCCTTTGGACTTCACTTTTGTCTGCCCCACTGTGGTTAGTATTCTGCTAAGGAAATAGCTTCAAAACTGAAACTCTCGCCCTCATA GTCACTGAAATTTCCAATTTTTCTTTGCTTATTCTAGAGATTACTGCCTTCAGTGACCGTTATGAAGAATTTGAGAAGCTAAACACCGAAGTATTAGGGGTCTCTGTCGACAGTGTGTGG TAAGTCAAATTTTTATTTCTCCACCTGAACCAAGAAAGAACATTCTGGTCTCAGCATTTTGAAAAATGGTTTCAAGTATTTGATGTACTCAGAACCTTGGCAAGTGGCAGTCTGATAATC GAATGGAACGTTTTCTTTTGGATAATGGAACGTTTGATTCCATGTTCATGTAGTTCTCGCATCTTGCGTGGGTCCAAACAGACAGAAAGTCGGGAGGGCTCGGTGATCTGAATTATCCTC TTGTTTCGGATATCACTAAATCCATTTCAAAATCGTTTGGAGTGCTCATCCCTGATCAGAGGTAAACGATTTCTTCTGACATAGTTGCATCATACTTGCATTGAGTCCAATCCACTTGTG TTCTTTCAAGTAACGTATAGCCACTTTGAATCAAAGCATTTTGCTAATATATAAGTACAGGGCATTGCACTGAGAGGGCTTTTCATCATAGACAAGGAAGGAGTCATTCAGCATTCCACC ATCAACAACCTCGGTATTGGCCGAAGTGTTGATGAGACAATGAGAACCCTCCAGAGGTAATAAAGAGAAAAATCACATCATTGAGATAGATAGATAAAGAGAGATTTGTTTTTGAGGTTT AGGGTTTAGATGCGTTATTTGTTGCTTCTTGTGATGTTGTCTTGCAGGCATTACAGTATGTTCAAGAAAACCCGGATGAAGTGTGCCCTGCGGGATGGAAGCCAGGGGAGAAATCAATGA AACCTGACCCCAAGCTCAGCAAAGAATACTTTTCAGCTATCTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTCAATGGCGTCTATAGCTTCTTCTTCTTCCACCACCCTACTCTCTTCCTCTAGGGTTCTTCTTCCCTCCAAGTCTTCTCTTTTATCTCCTACCGTCTCTTTCCCCAGAATCATACCC TCTTCCTCGGCATCATCCTCTTCTCTCTGTTCCGGGTTCTCCAGTCTCGGTTCCCTCACCACCAACCGCTCCGCCTCACGCCGGAACTTCGCCGTCAAGGCTCAGGCTGATGATTTACCA CTGGTCGGTAATAAGGCGCCTGATTTTGAAGCTGAGGCAGTTTTTGATCAAGAGTTCATAAAGGTGAAGCTCTCTGAGTACATTGGCAAAAAGTATGTTATTCTATTCTTCTACCCTTTG GACTTCACTTTTGTCTGCCCCACTGAGATTACTGCCTTCAGTGACCGTTATGAAGAATTTGAGAAGCTAAACACCGAAGTATTAGGGGTCTCTGTCGACAGTGTGTTCTCGCATCTTGCG TGGGTCCAAACAGACAGAAAGTCGGGAGGGCTCGGTGATCTGAATTATCCTCTTGTTTCGGATATCACTAAATCCATTTCAAAATCGTTTGGAGTGCTCATCCCTGATCAGGGCATTGCA CTGAGAGGGCTTTTCATCATAGACAAGGAAGGAGTCATTCAGCATTCCACCATCAACAACCTCGGTATTGGCCGAAGTGTTGATGAGACAATGAGAACCCTCCAGGCATTACAGTATGTT CAAGAAAACCCGGATGAAGTGTGCCCTGCGGGATGGAAGCCAGGGGAGAAATCAATGAAACCTGACCCCAAGCTCAGCAAAGAATACTTTTCAGCTATCTAG |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ACTTCTTTCT TCTTGTCTGA AAAATCTAGA AGAGCAGCTA TTTGGTTTCT CTATCCGATT CGTCTCTCTC ACGCCCTCAC GTTTATCCAC CTCATCCTCA AACCAAACCA CAAGACCTCT
TTTTTAAGTA ACCAATCACA GAGAGATAGA GAGAGAGAAC AGAGTCAATG TCAATGGCGT CTATAGCTTC TTCTTCTTCC ACCACCCTAC TCTCTTCCTC TAGGGTTCTT CTTCCCTCCA
AGTCTTCTCT TTTATCTCCT ACCGTCTCTT TCCCCAGAAT CATACCCTCT TCCTCGGCAT CATCCTCTTC TCTCTGTTCC GGGTTCTCCA GTCTCGGTTC CCTCACCACC AACCGCTCCG
CCTCACGCCG GAACTTCGCC GTCAAGGCTC AGGCTGATGA TTTACCACTG GTCGGTAATA AGGCGCCTGA TTTTGAAGCT GAGGCAGTTT TTGATCAAGA GTTCATAAAG GTGAAGCTCT
CTGAGTACAT TGGCAAAAAG TATGTTATTC TATTCTTCTA CCCTTTGGAC TTCACTTTTG TCTGCCCCAC TGAGATTACT GCCTTCAGTG ACCGTTATGA AGAATTTGAG AAGCTAAACA
CCGAAGTATT AGGGGTCTCT GTCGACAGTG TGTTCTCGCA TCTTGCGTGG GTCCAAACAG ACAGAAAGTC GGGAGGGCTC GGTGATCTGA ATTATCCTCT TGTTTCGGAT ATCACTAAAT
CCATTTCAAA ATCGTTTGGA GTGCTCATCC CTGATCAGGG CATTGCACTG AGAGGGCTTT TCATCATAGA CAAGGAAGGA GTCATTCAGC ATTCCACCAT CAACAACCTC GGTATTGGCC
GAAGTGTTGA TGAGACAATG AGAACCCTCC AGGCATTACA GTATGTTCAA GAAAACCCGG ATGAAGTGTG CCCTGCGGGA TGGAAGCCAG GGGAGAAATC AATGAAACCT GACCCCAAGC
TCAGCAAAGA ATACTTTTCA GCTATCTAGA GGCTAAGATT GAACACATGT TTGGTGAAAA TTAGCAATCA GAGTTGTTTT ATTCGTCTTT TCAAAGTTGG AGCAGAGTTG TTATTTTTAG
CCAAAGAACC TTTGTATCTA TCTCATCTTT CTCCTGTTTC TGCTATGTGA TTCTCCTTAA ATTGAATCAA AAATAAAGAA ATCCTTCTTT TCTTTTGCCA ATATTTATGT CTTTCACTTG
TGT
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Retrieve as FASTA
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