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Entry information : MlAhpD
Entry ID 4645
Creation 2007-02-14 (Filippo Passardi)
Last sequence changes 2007-02-14 (Filippo Passardi)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2010-05-06 (Christophe Dunand)
Peroxidase information: MlAhpD
Name MlAhpD
Class Alkylhydroperoxidase D    [Orthogroup: N/D] N/D
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Mycobacteriaceae Mycobacterium
Organism Mycobacterium leprae    [TaxId: 1769 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MlAhpD
start..stop		 S start..stop
MuAhpD 165 6.41e-53 1..143 1..161
MavAhpD_104 162 4.37e-52 1..161 1..178
MavpAhpD 161 2.15e-51 1..161 1..178
MtuAhpD 153 1.67e-48 1..158 1..175
Literature and cross-references MlAhpD
Literature Cole S.T. et al. Massive gene decay in the leprosy bacillus. Nature 409 (6823), 1007-1011 (2001)
DNA ref. GenBank:   NC_002677 (2433656..2434142)
Protein sequence: MlAhpD
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   158 (223)
PWM (Da):   %s   17061.65 (23361.4)  
PI (pH):   %s   6.14 (4.97) Peptide Signal:   %s   cut: 19 range:19-241
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSIEDLKVAL PEYTKNFKLI LGSIARNTVL NEKQL*GTLF HNVAATRNAQ MPTLESTAEA ANSSGFYLGR GFLDSQHGDL HSELRMNIIA NPGVDTRRFE Q*SSAVSPIN GCSHCVVDHE 
HTLREAGTDR KALSEAL*GH AVIVSDVAQW ITTAEILSTI G 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="TN". Three STOP codons and a frameshift, as well as a deletion of around 20 amino aicds (compare by BLAST). Probably a pseudogene (Twenty seven percent of the M. leprae genome consists of pseudogenes that have functional counterparts in M. tuberculosis, see "Genome Project" section in NCBI).