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Entry information : RxCMDn
Entry ID 4713
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2009-09-22 (Christophe Dunand)
Peroxidase information: RxCMDn
Name RxCMDn
Class Carboxymuconolactone decarboxylase (no peroxidase activity)    [Orthogroup: CMDn002]
Taxonomy Bacteria Actinobacteria Actinobacteria (class) Rubrobacteraceae Rubrobacter
Organism Rubrobacter xylanophilus    [TaxId: 49319 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RxCMDn
start..stop		 S start..stop
SavHCMDn02 187 2.31e-59 6..126 309..429
ScoHCMDn02 181 9.17e-57 3..126 325..447
BlHCMDn 169 1.95e-52 3..127 308..432
NspHCMDn 164 1.12e-50 2..128 276..400
Literature and cross-references RxCMDn
Literature Copeland A. et al.

US DOE Joint Genome Institute. Complete sequence of Rubrobacter xylanophilus DSM 9941. Unpublished. Submitted (12-JUN-2006)
Protein ref. UniProtKB:   Q1AVN9
DNA ref. GenBank:   NC_008148 (1602968..1602582)
Protein sequence: RxCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   128
PWM (Da):   %s   13969.04  
PI (pH):   %s   5.67
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSDPAYERGL RVRREVLGDA HVDRALASAT DFTADFQDFI TRYAWGEVWT RPGLDRKTRS CMTMTALIAA GRLDELEMHV RAALRIGLTP DEIKEVILHS AIYCGVPAAN SAFAVAQRAI 
SGQEDPGG 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="DSM 9941/NBRC 16129". Note that this sequence is immediately preceded by an hydrolase. However, there is no fusion of the two proteins (separated by a STOP codon, and frameshift). pcaB, pcaG and pcaH are also detected.