1. Browse the Database
  2. View Redoxidase
Entry information : RsoDCMDn
Entry ID 4723
Creation 2007-02-22 (Filippo Passardi)
Last sequence changes 2007-02-22 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-05-01 (Christophe Dunand)
Peroxidase information: RsoDCMDn
Name RsoDCMDn
Class Double CMD (no peroxidase activity)    [Orthogroup: DCMDn001]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoDCMDn
start..stop		 S start..stop
RleDCMDn 195 2.38e-62 16..232 52..266
RleDCMDn 84 1.78e-19 16..110 179..273
RleDCMDn 70 0.0000000000000154 102..238 11..145
BjaDCMDn 178 1.12e-55 3..228 30..255
BjaDCMDn 79 1.39e-17 16..110 172..266
BjaDCMDn 75 3.36e-16 144..230 47..130
MsuDCMDn 173 3.03e-54 14..234 10..230
MsuDCMDn 65 0.000000000000961 135..238 2..105
MsuDCMDn 54 0.00000000744 14..108 139..233
PstDCMDn 168 5.31e-52 16..241 38..261
PstDCMDn 86 3.81e-20 143..237 36..130
Literature and cross-references RsoDCMDn
Literature Salanoubat M. et al.

Genome sequence of the plant pathogen Ralstonia solanacearum

Nature 415 (6871), 497-502 (2002)
Protein ref. GenPept:   CAD14161 UniProtKB:   Q8Y1Q8
DNA ref. GenBank:   AL646052 (678246..678974)
Protein sequence: RsoDCMDn
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   242 (322)
PWM (Da):   %s   25679.42 (34737.0)  
PI (pH):   %s   6.4 (8.57) Peptide Signal:   %s   cut: 20 range:20-341
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNTSASSSTD PLFQMIGAVS PVLVPYTRHR IVEELWHRPG LQPRDRAIVT LSVLVSRNAS NAYDHYLNKA LDSGLKPSEL SELLTHLAFY ASFAYSFGAV AVLKGIFEAR GITVDALPEV  SPALLAAEEA LPGAAKRTAF LEANVAPASQ ALLHFTDALL NHEVWLRPGL ATRDRALATI ASLAAQGQAD VLPTYLERAL ASGVTKEAIG ELLAHVAFYG GWGNAIQAAS AVSRYWSDSA 
AG 

Retrieve as FASTA  
Remarks Complete sequence from Genomic. Strain="GMI1000".