Entry information : GmPrx20 (Glyma10g36680.1)
| Entry ID | 490 |
|---|---|
| Creation | 2005-11-09 (Christophe Dunand) |
| Last sequence changes | 2011-08-11 (Christophe Dunand) |
| Sequence status | partial |
| Reviewer | Qiang Li |
| Last annotation changes | 2011-12-13 (Qiang Li) |
Peroxidase information: GmPrx20 (Glyma10g36680.1)
| Name (synonym) | GmPrx20 (Glyma10g36680.1) | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Class III peroxidase [Orthogroup: Prx007]* | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Fabaceae Glycine | ||||||||||||||||||||||||||||||||||||
| Organism | Glycine max (soybean) [TaxId: 3847 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||
| Tissue types | Etiolated hypocotyls Leaves Roots Shoot tips |
||||||||||||||||||||||||||||||||||||
| Inducers | Cyst nematode infection Pathogen interaction Salt stress |
||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '490' 'complement(join(44788062..44788682,44788822..44789016,44789461..44789715))' |
Exons►
|
||||||||||||||||||||||||||||||||||||
Literature and cross-references GmPrx20 (Glyma10g36680.1)
| Literature | Public Soybean EST Project. |
|---|---|
| DNA ref. | Phytozome 12: Gm10 (44789715..44788062) |
Protein sequence: GmPrx20 (Glyma10g36680.1)
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Partial sequence from genomic and 17 ESTs. Very short 5' end (ATG) is missing. Based on the duplicated gene, "M" should be instead of "L" (CTG codon). Same sequence has been found in the genome and in one EST. Possibility of an extra 5'intron. |
||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
