View Redoxidase 4979

Entry information : Psti1CysPrx

Entry ID	4979
Creation	2007-03-11 (Nicolas Rouhier)
Last sequence changes	2007-03-11 (Nicolas Rouhier)
Sequence status	complete
Reviewer	Filippo Passardi
Last annotation changes	2012-04-27 (Catherine Mathe (Scipio))

Peroxidase information: Psti1CysPrx

Name

Psti1CysPrx

Class

1-Cysteine peroxiredoxin [Orthogroup: 1CysPrx001]

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia

Organism

Pichia stipitis [TaxId: 4924 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	Psti1CysPrx start..stop	S start..stop
Kl1CysPrx	338	7.86e-119	1..254	2..248
Nf1CysPrx	333	2.5e-116	16..256	31..268
Afum1CysPrx	331	1.37e-115	16..255	31..267
Yl1CysPrx	330	2.18e-115	18..254	10..248

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4979' 'complement(join(317942..318712))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	317942..318712	769
complement(join(317942..318712))

Literature and cross-references Psti1CysPrx

Literature	Jeffries,T.W., Grigoriev,I., Grimwood,J.A., Laplaza,J.M., Aerts,A., Salamov,A., Schmutz,J., Lindquist,E., Dehal,P., Shapiro,H., Jin,Y.-S., Passoth,V. and Richardson,P. US DOE Joint Genome Institute Genomic sequence of the xylose fermenting, insect-inhabiting yeast, Pichia stipitis Unpublished Submitted (12-DEC-2006)
Protein ref.	GenPept: ABN65661
DNA ref.	JGI genome: chr_3.1 (318712..317942)

Protein sequence: Psti1CysPrx

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	256 (306)
PWM (Da):	28439.89 (33545.1)
PI (pH):	9.27 (8.76)	Peptide Signal:	cut: 28 range:28-333

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MLSRVLIRSA AVRTALPRAT PVFRPSIVGT RFYSFKQEDQ PRIRIGSTAP NFEVNTTSGK IDFHSYIGDN WVVLFSHPAD FTPVCTTELG AFSKLKPEFD KRGVKLIGLS TEGVDSHNQW IKDIEEVVTG GEKFGFPIIA DSTKEVAYKY DMVTEDDFKN LESGVVFTVR SVFVIDPAKK IRLTMTYPAS TGRNTAEVLR VVDALQLADK RGIATPVDWT EGQDVIIPPT VSNEAAKEKF
GSFKQVKPYL RFTKLD

Retrieve as FASTA

Remarks

Genomic (Chromo 3, no introns). strain="CBS 6054".

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGTTGTCAA GAGTGTTGAT TCGTTCTGCT GCTGTCAGAA CTGCTCTTCC CAGAGCCACC CCGGTTTTCA GACCATCTAT AGTCGGAACT CGTTTCTATT CGTTCAAGCA AGAAGACCAA CCCAGAATCA GAATCGGCTC CACCGCTCCA AACTTCGAAG TCAACACCAC TTCTGGCAAA ATTGACTTCC ATAGCTACAT CGGCGACAAT TGGGTTGTTC TTTTCAGTCA CCCAGCTGAT TTCACTCCAG TCTGTACCAC CGAGTTAGGT GCATTTTCCA AGTTGAAGCC GGAATTCGAT AAGAGAGGTG TCAAGTTGAT TGGTCTTTCC ACCGAAGGTG TCGATAGCCA CAACCAATGG ATCAAGGATA TCGAGGAAGT TGTCACCGGT GGTGAAAAGT TTGGCTTCCC TATCATTGCC GATTCCACCA AAGAAGTTGC TTATAAATAT GATATGGTTA CTGAAGATGA CTTCAAGAAT CTCGAATCCG GAGTTGTATT CACTGTCAGA TCTGTCTTCG TCATTGACCC AGCCAAAAAG ATTAGATTGA CCATGACATA CCCTGCTTCT ACTGGTAGAA ACACTGCTGA AGTATTGAGA GTTGTTGATG CTTTGCAATT GGCTGACAAG AGAGGCATTG CTACTCCCGT CGACTGGACC GAGGGCCAGG ATGTCATCAT TCCTCCTACA GTTTCTAACG AGGCTGCTAA GGAAAAGTTT
GGAAGCTTCA AACAAGTCAA GCCATACTTG AGATTCACCA AGTTGGACTA A

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA