Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
321 (297) |
PWM (Da): |
34234.33 (31792.9) |
Transmb domain: |
i7-29o |
PI (pH): |
9.69 (9.52) |
Peptide Signal: |
cut: 25 range:25-321 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASLKINAIV LFILVSLLIG SSSAQLSTGF YSKSCPKLYQ TVKSAVQSAI NKETRMGASL LRLFFHDCFV NGCDGSLLLD DTSSFTGEKR AAPNVNSARG FEVIDNIKSA VEKVCPGVVS
CADILAVTAR DSVVILGGPN WNVKLGRRDS RTASQSAANS GIPPATSNLN RLISSFSAVG LSTKDMVALS GAHTIGQARC TSFRARIYNE TNNLDASFAR TRQSNCPRSS GSGDNNLAPL
DLQTPNKFDN NYFKNLVDKK GLLHSDQQLF NGGSADSIVT SYSNNPSSFS SDFVTAMIKM GDIRPLTGSN GEIRKNCRRL N
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and 1 EST. Cultivar="Samsun NN". Uncorrect prediction from SGN (splicing error introns 1 and 3) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTT TAAAGATTAA TGCTATAGTT TTGTTTATTT TAGTGAGTTT ACTAATTGGA AGCTCATCAG CTCAACTATC AACTGGTTTT TACTCAAAAT CTTGTCCTAA ACTTTATCAA
ACTGTGAAAT CAGCAGTGCA ATCTGCTATT AACAAGGAAA CAAGAATGGG TGCTTCTCTT CTTCGTCTAT TCTTCCATGA TTGCTTCGTC AATGTAATTT ACCATCTTCA TTTCCTCTTT
TATTTTTCCT TTTTTCCTTT TTTATAATTA TTACTCCCTC GGTTTCATTT TATATGACAC AATTACTATT TAAGGAGTCA AAGAAGGTGC CTTTTGACCA CGTTTTATGT AAATACTTCT
CAAATATTTT AAATTGTTAG GTATTTTAAC TGAAGGGCAA CCTTGACGTA ACTAGTAAAG TTGTTGCCAT GTGACCAGGA GGTCAAGAGT TCAAGCCGTG AAAATAGATT ATTGCAGAAA
TGAAGTCTAA GACTACATAT ACCATAGACC CTTATGGTCC AGCCCTTTCC TGGACCTCGA GTATAGTAAG AGCTTTAGTA CACCAGGAGT TTAATTGTTA AGGGATTTTT ACAGAAATAG
CTGGCTGAAT TCACTGTTTA TTTTTCCTAT AGTTGTATAC ATAGATTATC AACTGATTAT ATATGGTTAT ACACATACAG TTAAATCTCT CTATAACGGC CTTATTCATT CCAGATTTTT
TTGGCTATTA TAGCGAAGTG CTATTAAGGA AGAACATACA TTATAACTTA CAGAGGCGGA CCCCAGAATT TTTACACGAC GGGGGTACAT TTTCTGCTCA ACCAATGTCC CCTAAAGGCT
TTTAGTGTTC AGGGTGCCAA CTGCTTTAAA TTAACCATTT TTAAGATATA TATATATATA TTTATATATA TATATATATA TATATATATA TATATATATA CGTATATATA TACAGGATTT
CGGTCGAAGT TTACGGGGTC CGGTGACCCC TCACCCATAC ACATGGGTCC GCCTCTGATA ACATAGCGTG AAAAATTGGT TTCATACAAA ACTTGGCTTT TATAGTAAAT GACTGTTATA
TATCGATGCT GTTATATCGA GGTTTGACTG TATTATATAT AAATTATACA TATATTACAC GGCTATTTTT AGTTTAAACA GTTGAGTGAA CGACTATTTA AATTAATTCT TTTTTAATTA
TTTTCTTTCA GGGATGCGAT GGATCGCTAC TCCTCGATGA TACATCAAGC TTCACAGGAG AGAAAAGGGC TGCACCAAAT GTTAATTCTG CTAGAGGATT TGAAGTTATT GACAATATCA
AATCTGCTGT GGAGAAAGTG TGCCCTGGTG TTGTTTCTTG TGCTGATATT TTGGCCGTTA CTGCTCGGGA CTCTGTTGTC ATTGTAAGTT TTAATTATAT TATCAAGACT TTTTCAAGTA
AAAACATCTG CATTTTAAGT TTATATAGAG TAATTTTGGT GATCTTATTA TATGTATATA TGCAGCTTGG AGGTCCCAAT TGGAATGTAA AATTGGGAAG AAGAGATTCT AGAACTGCAA
GTCAAAGTGC TGCCAATAGT GGCATTCCTC CTGCTACTTC TAACCTTAAT AGACTCATCT CAAGTTTCAG TGCTGTTGGC CTTTCTACCA AAGATATGGT TGCCTTATCT GGTTTGTTCT
CCCCCCCTCC CCCCCATAAT TCTTCTCCTT TGTTATAGAA TTTAAGTCAT TTAAACGGAT AATATAAATC TTTTTAACCC TATCGCTATA ATTTAACATG TTATAGCATG TACGTACCAT
TATTCTGGAT TATCGGTCAA TACTTACTAA ATAGAGTTAC TTGTGATTAC CTTTTAAATA ACGTACTTTG TATTTTCTTA TACTGTCAGT TCATAAATCT TAAACTCTTT ATAAACACTA
GTGTTCGTCA AGTTGCTTAA ATGTTGACTA TTTGATCGGA TACCTGCTAT CTCCTTCCAA CAATTATACC GCGGATTTCC ACCCGCATTT ATTCTAGCTT GCCATAATCT CCCCCTTGCC
CCCCCCCCCA ACTCCCCCTG CCCCCCAAAA CCCCCACCCC CCAAATTGAG AGGAAAATAT ACTCAACAAT CCAGAAAAAG CTGATGGAAT TACATATAGA GTGCCTAAAT TTAAACAGAA
TTTTTATTGT AGATAAGCTA GATTCTAGAA CATACAAGTT CTATTAAAGT ATGTTCATCT CAACTCACTA AATCTAGCTG TATTTATATT AAAACAGGTA ATTACAAATT AAACTCACAT
TATAACAAAA AATTTTGCAC ATTATAAACG TCCCCGGCTT AGGCCTTAAC ACCAATAACA GAGGAAATCT CTGAAAATTA AAGGGCAAAG ATCATTTTTA GTCTGCGGCC GAAACTATTT
AAATTTGGTA TCCGTAAAAG TGTATAAAAA TTTGCATATT TTTTGTCTAT AACATATAAA AATGTATGTA TACACAATTT CTTTTCCAGC TATTATTTTA TGAGCGGCTG TAATCAATTT
CCTAAAACAA ACTATGGTTA TGTTTGTATT GGACAGGGGC TCACACAATT GGACAAGCAA GATGTACATC TTTTAGGGCA CGTATATACA ACGAGACCAA TAACTTAGAT GCATCATTTG
CACGAACTAG ACAAAGCAAC TGCCCAAGAA GTTCAGGCTC AGGGGACAAC AATTTGGCAC CACTTGATCT CCAAACTCCT AACAAATTTG ACAACAATTA TTTCAAGAAT CTTGTTGACA
AAAAGGGTCT TCTTCACTCT GATCAACAAC TCTTTAATGG TGGATCTGCC GATTCGATTG TGACATCTTA CAGTAACAAT CCTAGCAGTT TTAGCTCTGA TTTTGTCACT GCTATGATTA
AGATGGGTGA TATTCGTCCA CTTACTGGTT CTAATGGAGA GATTAGGAAG AATTGCCGTA GGCTCAATTA ACGTTGATTA GCATTTTTTT TTTGTGTGTG TGAACTCTCC TGTGTGGGCT
GGGTAAATCT GCGTACAATT GACTCTTGTG GTCCGACCCT TCCTCGGACC TCGCGTATAA CGGAGCTTAG TGTACCGGGC ATTTTGTGTG TGTGTGTGAA CTGCAAACTT TGAGACTTCT
TTATTTTTTA CAATGTTTTA CTTTCCTTTT AAGTTTCTTT CTTAATATGC AGGTTCAATG TATGTTACCT TGTCAAAGCT TAAAAGCACA ACTTTTTCTC GA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTTGACAACA ATTATTTCAA GAATCTTGTT GACAAAAAGG GTCTTCTTCA CTCTGATCAA CAACTCTTTA ATGGTGGATC TGCCGATTCG ATTGTGACAT CTTACAGTAA CAATCCTAGC
AGTTTTAGCT CTGATTTTGT CACTGCTATG ATTAAGATGG GTGATATTCG TCCACTTACT GGTTCTAATG GAGAGATTAG GAAGAATTGC CGTAGGCTCA ATTAACGTTG ATTAGCATTT
TTTTTTTGCG TGTGTGAACT CTCCTGTGTG GGCTGGGTAA ATCTGCGTAC AATTGACTCT TGTGGTCCGA CCCTTCCTCG GACCTCGCGT ATAACGGAGC TTAGTGTACC GGGCATTTTG
TGTGTGTGTG TGAACTGCAA ACTTTGAGAC TTCTTTATTT TTTACAATGT TTTACTTTCC TTTTAAGTTT CTTCCTTAAT ATGCAGGTTC AATGTATGTT ACCTTGTCAA AGCTTAAAAG
CACAACTTTT TCTCGAGTAA AGGACTGTAT TTGTATCATT GTTGGAATAT TATGAATAAA AACACCCTTT TTGA
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Retrieve as FASTA
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