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Entry information : VvPrx30 (GSVIVT01030616001)
Entry ID 5113
Creation 2009-02-25 (Christophe Dunand)
Last sequence changes 2009-02-25 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-07-02 (Qiang Li)
Peroxidase information: VvPrx30 (GSVIVT01030616001)
Name (synonym) VvPrx30 (GSVIVT01030616001)
Class Class III peroxidase    [Orthogroup: Prx027]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx30
start..stop		 S start..stop
VvPrx31 608 0 1..327 1..327
NnPrx21 506 0 1..327 1..328
CclPrx104 502 0 1..327 1..328
EgrPrx163 500 1.81e-180 1..327 1..326
Literature and cross-references VvPrx30 (GSVIVT01030616001)
Literature Velasco,R., Zharkikh,A., Troggio,M., Bhatnagar,S., Pindo,M., Cartwright,D., Coppola,G., Eldredge,G., Vezzulli,S., Malacarne,G., Mitchell,J., Stefanini,M., Segala,C., Gutin,N., Grando,M.S., Pruss,D., Dematte',L., Cestaro,A., Toppo,S., Fontana,P., Skolnick,M., Gutin,A., Salamini,F. and Viola,R. The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
Protein ref. GenPept:   CAO24152
DNA ref. GenBank:   AM467851 (31874..33552)  CAAP02000028.1 (73867..75550) [Mismatch]
Protein sequence: VvPrx30 (GSVIVT01030616001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (301)
PWM (Da):   %s   35448.13 (32599.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.37 (8.54) Peptide Signal:   %s   cut: 27 range:27-327
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSTQKLFSAL FLQLILAIFV LDVADAQYLK LGFYKNTCPA AEDIVRETTA QYISKAPTLA ASLLRIHFHD CFVRGCDGSV LLNSTKNNQA EKDAIPNLSL RGYQVIDAAK SAVEKKCPGV  VSCADILALV ARDALSMING PYWQVPTGRR DGKVSVALEA LTNLPPPFAN ITQLKAMFQS KGLSIKDLAV LSGGHTIGIS PCSSFTNRLY NFTGKGDTDP SMDPNYVIQL KKKCKPGDVS 
TVVEMDPGSF KSFDEDYYSV VAKRRGLFQS DAALLDDVET SKYVRLQSFS HGESFGQDFA ASMVKMGRIG VLTGNAGEIR KYCAFVN 

Retrieve as FASTA  
Remarks Complete sequence genomic (chromo 12, 4 exons). No ESTs. Cultivar="Pinot Noir". Also contain two other peroxidase sequences.