Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
492 |
PWM (Da): |
56546.48 |
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PI (pH): |
7.69 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDPYKYRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVHARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIR GFAVKFYTRGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLTWCWMFDDVGIPQDYRHMEGFGVHTYTLIAKSGKVLFVKFHWKPTCGIKNLTDEEAK VVGGANHSHATKDLHDAIASGNYPEWKLFIQTMDPADEDKFDFDPLDVTKIWPEDILPLQPVGRLVLNRTIDNFFNETEQLAFNPGLVVPGIYYSDDKLLQCRIFAYGDTQRHRLGPNYL QLPVNAPKCAHHNNHHEGFMNFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQK LASRLNVRPSI* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (6 introns), 10 cDNA and 1958 ESTs. Three SwissProt/TREMBL accessions: Q42547, Q2V4M3 and Q2V4M4. Cultivar="Landsberg erecta" and "Columbia". |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGGCCAATCT CCATATAAGC TCAGTCTATG TGAGGTACAA TCAATCTCAT CGATCTATCA TCGCTTGGTC GTTAAATCCG TCAAAAAGAT AATCACATGT GTTGTTGTTT CTTGTCTATA
TAATAATAAT GCTTGTAATC CCAAAAACTC ATGTTTCCTT CCTTTCTACT CTCACTGTCT TTGTAATCTC TTTTTACAAT AAATCAATGT TTCTTGAAGC AGTAAACAAT TTCTAAGATT
TATGGTGGTC GTTATACATA TTATTAATTC AGGAAAAAAA AGAGAAGATA CCGTAATTGA ACATGTATTA TTTTAAGGAG AATCCTGAAA TGGATCAACA ATTGTCTAAT TATGGTATAG
TATCTGGCGA AATCAAAGAC GATATCATCC ACACGTAATT AGTTTGACTA TTAATACGAG GATTATCATT TGGATAAGGA TTAACAAAGA CAAAACACAT ACGTGTTTTG GTGTTGAGCT
AAAATAAGAT ATTTTGGCTC TCGCTATAAA AAAAAAATCG ACAACAGTGC AGACACACGC CGATTTGCGA GATACACACA GTCTCACCTA AAAATCGCAA AAGAAGAAAA ATTCGGATCA
AAATTGTCTT CAAGCATCAT GGATCCATAC AGGGTACATC GATTGATTCT CTTTTTTTGT AATCTGTGAT TTTACCTTAC TTGATTTCGT ATCGATTTGG TGTGATTTCG TGTTGAATCC
AAAGTGTATG AATGATCTCT CTCTCTCGGT TAAAATGATG CAAAATTGGG GTGATTGTTC GACTTGTTGA GGTTTTTTTG TGTGAATCGA TTTCTTTATT ATATAGTGGA GATTGGGTTT
CGATTTGCAT GCGTTGAAGA TTCCACTGGA AAATTCAACA TGTTTTTCCG TCTATTGATT GTTTATTTGT CAACATGCTC ATGCTCATGC TCATGTTCTA ATACACAAGT CTTAAGGCTG
ACGTGATCTG TCAATATCGT TGTACATGTT TTAAGGTTT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCCTTACAAGAGGTATCTTCGATCATATTCTTCTTACTTTTTCTTTGTTTTTGTGTGGTGTATGTGTATCTTAATTAGAATTAGGTTCAACTATATATGCTCGTTTTCTAAACTA TTTTTTAATTGGATTGATGTTCTTAAATCTTAAGGGTCAAAATACTTTTTATGCTCAAAAACTTACTTAAATTCTGTGATCGCTTGAACCTAAGTTGATGATGTTGATTTCTGTTTTGGC TGGCTATCTTTAATTAAAACGTTTAACCACTGCGTGAGAAAGACACGCCACATGTGGTTTTTGTTGTTTTTTTCCTTAGATTAGAAGTTATTTTGTTGTTGTTTTTTTTTTTATTATTAT TACACACATGTGTTCTAAAAATCGGACGTTCAAATGATATAATCGATTGTTTAGACGTCCGACCGTATATTATTTTAGTGATATCAGCCAAATCAGATTAAGTAATCATCAACAAAATGA TTGATCAGATCTACTAAACACCTGAGTAATCAAATCTACACGTTTGATTAATCAAATTAAATAACCGATCAGTTAGATCTATACATATGATAAATCTTTTTTTACAACATTCGGTTAATC AAACCATTGTCGGTCGATCTATCAATACAAGTGTATTTTTTTTTCACATACAAAAAAATTATCTCACCGACGAAAAAAAAATAAAAAATTATTATGTAGATCCATCGAACAAAAGGCTTG AATATACGGAAGTCACTTAAAAGTGTAATAATCGAATAAATATTAGTGGATAAAATGAAATTTATCTACAACCCTACTCTCCGACATGTTACTGTTTGCGTCATCAAATCTAAAGCCTTT TTGGCAAATAATGGTCGGAAGACTACTCGTGTCGGGATGGACCACCCGGATCCGATCAGGAAACGGGTTTTGATATGTTTCGGGTTACGACAAAAAATTAGGGCTTTTTATCAAATCAAT CAGTTGGTAGTAAAATTTTGTGGATTGTTCTTGTCGATTCCGTTTGATTGTTGACCAAATTTCTTCCTGGATTTTGTTGATAATCGATCGTATAATGGTGATTGCAGTATCGTCCTTCAA GCGCGTACAACGCCCCATTCTACACCACAAACGGTGGTGCTCCAGTCTCCAACAACATCTCTTCCCTCACCATCGGAGAAAGAGAGGTATCGTAACCCTGAATTTCAAGAGTCTATCAAT AAGAATCGGAACTTGTTGGATTTATGAAAGAGATAAAACTGAGATATAGAGTCTAAGCTGAGATCTTGTTCGTGAAGCGTGATGTGATTATTTTTAACATGTGTTACTTCGTAATGGGCA GGTCCGGTTCTTCTTGAGGATTATCATTTGATCGAGAAGGTTGCTAATTTCACCAGAGAGAGGATCCCTGAGAGAGTGGTTCATGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAAGTC ACCCATGACATTTCAAACCTCACTTGTGCTGATTTTCTCAGAGCCCCTGGTGTTCAAACTCCGGTTATTGTCCGTTTCTCCACCGTTGTCCACGAACGTGCCAGTCCTGAAACCATGAGG GATATTCGTGGTTTTGCTGTCAAGTTTTACACCAGAGAGAGGTATAAGAAAAGATTCAAAGTTTCCATTTTTAATCGTCTTTTAGCTTCTTTAGAATCAGGACTGATTTTTGTCTTGTTA CTGTTATGATCAGGGAAACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCCGTGATGGGATTCAGTTCCCGGATGTTGTCCACGCGTTGAAACCTAACCCGAAAACAAACAT CCAAGAGTACTGGAGGATTCTGGACTACATGTCCCACTTGCCTGAGAGTTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATTCCACAAGATTACAGGCACATGGAGGGTTTCGG TGTCCACACCTACACTCTTATTGCCAAATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCAACTTGTGGGATCAAGAATCTGACTGATGAAGAGGCCAAGGTTGTTGGAGGAGC CAATCACAGCCACGCCACTAAGGATCTCCACGATGCCATTGCATCTGGCAACTACCCCGAGTGGAAACTTTTCATCCAGACCATGGATCCTGCAGATGAGGATAAGTTTGACTTTGACCC ACTTGATGTGACCAAGATCTGGCCTGAGGATATTTTGCCTCTGCAACCGGTTGGTCGCTTGGTTCTGAACAGGACCATTGACAATTTCTTCAATGAAACTGAGCAGCTTGCGTTCAACCC GGGTCTTGTGGTTCCTGGAATCTACTACTCAGACGACAAGCTGCTCCAGTGTAGGATCTTTGCTTATGGTGACACTCAGAGACATCGCCTTGGACCGAATTATTTGCAGCTTCCAGTCAA TGCTCCCAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGAACTTCATGCACAGAGATGAGGAGAGGTACGTCTTAGTACACCACTTGAGCTACCATTGTTAGTCTTTTTACTT GGAATCAAAATTCTCATTTGGTTTGTACTTTTTACAGATCAATTACTACCCCTCAAAGTTTGATCCTGTCCGCTGCGCTGAGAAAGTTCCCACCCCTACAAACTCCTACACTGGAATTCG AACAAAGAGGTCCGATTCCTGCCATGCCTTCTCTAAATCTTCAAATCCTAAACTCAAGTTTATTAGAATATTGGTGCTAAGAAAACCTTTTAATTGCTAATGTTGCAGTGCGTCATCAAG AAAGAGAACAACTTCAAACAGGCTGGAGACAGGTACAGATCATGGGCACCAGACAGGCAAGACAGGTTTGTTAAGAGATGGGTGGAGATTCTATCGGAGCCACGTCTCACCCACGAGATC CGCGGCATCTGGATCTCTTACTGGTCTCAGAGGTCAGAACAAAAAAACACTCGGTCAAATTTCTACGTCCTTTTTACCAAGTTTCAGCAAACTAAAACATTATTTATCTCTCTGTATCTC TCAGGCTGATCGATCCTTGGGACAGAAACTTGCAAGCCGTCTGAACGTGAGGCCAAGCATCTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGATCCTTACAAGTATCGTCCTTCAAGCGCGTACAACGCCCCATTCTACACCACAAACGGTGGTGCTCCAGTCTCCAACAACATCTCTTCCCTCACCATCGGAGAAAGAGGTCCGGTT CTTCTTGAGGATTATCATTTGATCGAGAAGGTTGCTAATTTCACCAGAGAGAGGATCCCTGAGAGAGTGGTTCATGCTAGAGGAATCAGTGCTAAGGGTTTCTTTGAAGTCACCCATGAC ATTTCAAACCTCACTTGTGCTGATTTTCTCAGAGCCCCTGGTGTTCAAACTCCGGTTATTGTCCGTTTCTCCACCGTTGTCCACGAACGTGCCAGTCCTGAAACCATGAGGGATATTCGT GGTTTTGCTGTCAAGTTTTACACCAGAGAGGGAAACTTTGATCTTGTTGGGAACAACACTCCGGTGTTCTTCATCCGTGATGGGATTCAGTTCCCGGATGTTGTCCACGCGTTGAAACCT AACCCGAAAACAAACATCCAAGAGTACTGGAGGATTCTGGACTACATGTCCCACTTGCCTGAGAGTTTGCTCACATGGTGCTGGATGTTTGATGATGTTGGTATTCCACAAGATTACAGG CACATGGAGGGTTTCGGTGTCCACACCTACACTCTTATTGCCAAATCTGGAAAAGTTCTCTTTGTGAAGTTCCACTGGAAACCAACTTGTGGGATCAAGAATCTGACTGATGAAGAGGCC AAGGTTGTTGGAGGAGCCAATCACAGCCACGCCACTAAGGATCTCCACGATGCCATTGCATCTGGCAACTACCCCGAGTGGAAACTTTTCATCCAGACCATGGATCCTGCAGATGAGGAT AAGTTTGACTTTGACCCACTTGATGTGACCAAGATCTGGCCTGAGGATATTTTGCCTCTGCAACCGGTTGGTCGCTTGGTTCTGAACAGGACCATTGACAATTTCTTCAATGAAACTGAG CAGCTTGCGTTCAACCCGGGTCTTGTGGTTCCTGGAATCTACTACTCAGACGACAAGCTGCTCCAGTGTAGGATCTTTGCTTATGGTGACACTCAGAGACATCGCCTTGGACCGAATTAT TTGCAGCTTCCAGTCAATGCTCCCAAATGTGCTCACCACAACAATCACCATGAAGGTTTTATGAACTTCATGCACAGAGATGAGGAGATCAATTACTACCCCTCAAAGTTTGATCCTGTC CGCTGCGCTGAGAAAGTTCCCACCCCTACAAACTCCTACACTGGAATTCGAACAAAGTGCGTCATCAAGAAAGAGAACAACTTCAAACAGGCTGGAGACAGGTACAGATCATGGGCACCA GACAGGCAAGACAGGTTTGTTAAGAGATGGGTGGAGATTCTATCGGAGCCACGTCTCACCCACGAGATCCGCGGCATCTGGATCTCTTACTGGTCTCAGGCTGATCGATCCTTGGGACAG AAACTTGCAAGCCGTCTGAACGTGAGGCCAAGCATCTAG |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TAGGATCTCA ACACTCTCAC TAAACCAAAA TCCTCAAAAG CCTATTTGGG GGATCATCAA CCTTCTATCA TCACCATGGA TCCTTACAAG TATCGTCCTT CAAGCGCGTA CAACGCCCCA
TTCTACACCA CAAACGGTGG TGCTCCAGTC TCCAACAACA TCTCTTCCCT CACCATCGGA GAAAGAGGTC CGGTTCTTCT TGAGGATTAT CATTTGATCG AGAAGGTTGC TAATTTCACC
AGAGAGAGGA TCCCTGAGAG AGTGGTTCAT GCTAGAGGAA TCAGTGCTAA GGGTTTCTTT GAAGTCACCC ATGACATTTC AAACCTCACT TGTGCTGATT TTCTCAGAGC CCCTGGTGTT
CAAACTCCGG TTATTGTCCG TTTCTCCACC GTTGTCCACG AACGTGCCAG TCCTGAAACC ATGAGGGATA TTCGTGGTTT TGCTGTCAAG TTTTACACCA GAGAGGGAAA CTTTGATCTT
GTTGGGAACA ACACTCCGGT GTTCTTCATC CGTGATGGGA TTCAGTTCCC GGATGTTGTC CACGCGTTGA AACCTAACCC GAAAACAAAC ATCCAAGAGT ACTGGAGGAT TCTGGACTAC
ATGTCCCACT TGCCTGAGAG TTTGCTCACA TGGTGCTGGA TGTTTGATGA TGTTGGTATT CCACAAGATT ACAGGCACAT GGAGGGTTTC GGTGTCCACA CCTACACTCT TATTGCCAAA
TCTGGAAAAG TTCTCTTTGT GAAGTTCCAC TGGAAACCAA CTTGTGGGAT CAAGAATCTG ACTGATGAAG AGGCCAAGGT TGTTGGAGGA GCCAATCACA GCCACGCCAC TAAGGATCTC
CACGATGCCA TTGCATCTGG CAACTACCCC GAGTGGAAAC TTTTCATCCA GACCATGGAT CCTGCAGATG AGGATAAGTT TGACTTTGAC CCACTTGATG TGACCAAGAT CTGGCCTGAG
GATATTTTGC CTCTGCAACC GGTTGGTCGC TTGGTTCTGA ACAGGACCAT TGACAATTTC TTCAATGAAA CTGAGCAGCT TGCGTTCAAC CCGGGTCTTG TGGTTCCTGG AATCTACTAC
TCAGACGACA AGCTGCTCCA GTGTAGGATC TTTGCTTATG GTGACACTCA GAGACATCGC CTTGGACCGA ATTATTTGCA GCTTCCAGTC AATGCTCCCA AATGTGCTCA CCACAACAAT
CACCATGAAG GTTTTATGAA CTTCATGCAC AGAGATGAGG AGATCAATTA CTACCCCTCA AAGTTTGATC CTGTCCGCTG CGCTGAGAAA GTTCCCACCC CTACAAACTC CTACACTGGA
ATTCGAACAA AGTGCGTCAT CAAGAAAGAG AACAACTTCA AACAGGCTGG AGACAGGTAC AGATCATGGG CACCAGACAG GCAAGACAGG TTTGTTAAGA GATGGGTGGA GATTCTATCG
GAGCCACGTC TCACCCACGA GATCCGCGGC ATCTGGATCT CTTACTGGTC TCAGGCTGAT CGATCCTTGG GACAGAAACT TGCAAGCCGT CTGAACGTGA GGCCAAGCAT CTAGAGGCCA
ATCTCCATAT AAGCTCAGTC TATGTGAGGT ACAATCAATC TCATCGATCT ATCATCGCTT GGTCGTTAAA TCCGTCAAAA AGATAATCAC ATGTGTTGTT GTTTCTTGTC TATATAATAA
TAATGCTTGT AATCCCAAAA ACTCATGTTT CCTTCCTTTC TACTCTCACT GTCTTTGTAA TCTCTTTTTA CAATAAATCA ATGTTTCTTG AAGCAGTAAA CAATTTCTAA GATTTATGGT
GGTCGTTATA CATATTATTA ATTCAGGAAA AAAAAGAGAA GATACCGTAA TTGAACATGT ATTATTTTAA GGAGAATCCT GAAATGGATC AACAATTGTC T
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Retrieve as FASTA
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