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Entry information : VvPrx40 (GSVIVT01029773001)
Entry ID 5164
Creation 2009-02-26 (Christophe Dunand)
Last sequence changes 2009-02-26 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-07-02 (Qiang Li)
Peroxidase information: VvPrx40 (GSVIVT01029773001)
Name (synonym) VvPrx40 (GSVIVT01029773001)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx40
start..stop		 S start..stop
VvPrx41 594 0 2..311 15..324
VvPrx52 588 0 6..311 19..324
VvPrx97 576 0 6..311 19..324
CsPrx44 514 0 1..311 14..325
Literature and cross-references VvPrx40 (GSVIVT01029773001)
Literature Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
Protein ref. GenPept:   CAO43464 [Mismatch]
DNA ref. GenBank:   CAAP02002014.1 (14691..15814) [Mismatch]  AM457182 (18038..16860) [Sequencing error]
EST ref. GenBank:   FC059396.1 [5' end]  EC944332 [3' end]
Cluster/Prediction ref. UniGene:   Vvi.18197
Protein sequence: VvPrx40 (GSVIVT01029773001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   311
PWM (Da):   %s   33293.76  
PI (pH):   %s   8.21
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAALVQGQG TRVGFYSRTC PQAESIVQKT VQSHFQSNPA IAPGLLRMHF HDCFVRGCDA SILINGTSTE KTTVPNSLIN GYDVIDDAKT QLEAACPGVV SCADILALAA RDSVVLTKGL  TWKVPTGRRD GRVSLASDVN NLPSPRDSIE AQKQKFADKG LTDQDLVTLV GGHTIGTSAC QFFRYRLYNF STTTANGADP SMDATFVTQL QALCPADGDG SRRIALDTGS SNTFDASFFT 
NLKNGRGVLE SDQKLWTDAS TKTLVQRFLG VRGLRGLNFN VEFGTSMVRM SNIGVKTGTE GEIRRVCTAI N 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 12, introns 2 and 3) and 2 ESTs. cultivar="Pinot Noir" and "PN40024". The contig contains two peroxidase sequences (VvPrx41). Also found in the AM466124 (2 or 3 mismatches, only one peroxidase sequence) and CAAP02004953.1.