1. Browse the Database
  2. View Redoxidase
Entry information : VvPrx44 (GSVIVT01010268001)
Entry ID 5168
Creation 2009-02-26 (Christophe Dunand)
Last sequence changes 2009-02-26 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-07-02 (Qiang Li)
Peroxidase information: VvPrx44 (GSVIVT01010268001)
Name (synonym) VvPrx44 (GSVIVT01010268001)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx44
start..stop		 S start..stop
VvPrx45 669 0 1..331 1..331
VvPrx33 587 0 1..331 1..331
VvPrx50 552 0 30..331 1..301
VvPrx51 549 0 30..331 1..302
Literature and cross-references VvPrx44 (GSVIVT01010268001)
Literature Velasco,R., et al., The first genome sequence of an elite grapevine cultivar (Pinot noir Vitis vinifera L.): coping with a highly heterozygous genome
Protein ref. GenPept:   CAO46728
DNA ref. GenBank:   AM427307 (6776..5458)  CAAP02000049.1 (149376..148058)
Protein sequence: VvPrx44 (GSVIVT01010268001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (297)
PWM (Da):   %s   35297.59 (31814.9) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.89 (7.98) Peptide Signal:   %s   cut: 35 range:35-331
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLAAGSSRW PSCVSHAFIL VAGLLILSNM PCEAQLSSSF YDNACPSALS TIRTAIRTAV SRERRMAASL IRLHFHDCFV QGCDASILLD DSPTIQSEKN APNNNNSVRG FEVIDNVKSQ  VENICPGVVS CADILAVAAR DASVAVGGPT WTLKLGRRDS TTSGLSQAAT NLPTFRDGLD RLTSLFSSKG LSTRDMVALS GSHTIGQARC VTFRDRIYGN GTNIDAGFAS TRRRRCPADN 
GNGDDNLAPL DLVTPNSFDN NYFKNLIQRK GLLQSDQVLF NGGSTDSIVT EYSKSPSTFS SDFSSAMVKM GDIEPLIGSA GVIRKFCNVI N 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 1, 3 introns) and No EST. Three similar encoding peroxidases in the same contig. Contig position: 103-497 (only the last exon), 5458-6779 and 11756-13077. Cultivar="Pinot Noir" and "PN40024". Also found in AM435987 (1963-3282).