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Entry information : NcLDS01
Entry ID 5308
Creation 2007-05-01 (Christophe Dunand)
Last sequence changes 2007-05-01 (Christophe Dunand)
Sequence status complete
Reviewer Marcel Zamocky
Last annotation changes 2012-04-25 (Catherine Mathe (Scipio))
Peroxidase information: NcLDS01
Name NcLDS01
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Sordariaceae Neurospora
Organism Neurospora crassa    [TaxId: 5141 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NcLDS01
start..stop		 S start..stop
CgLDS01 1482 0 35..1134 27..1099
AalcLDS01 1280 0 6..1134 8..1120
MgrLDS01 1261 0 49..1134 31..1108
GzLDS01 1182 0 76..1134 57..1105
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5308' 'join(174495..174813,174877..175115,175174..177702,177781..178098)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 174495..174813 317 N° 2 174877..175115 237 N° 3 175174..177702 2527 N° 4 177781..178098 316
join(174495..174813,174877..175115,175174..177702,177781..178098)


exon

Literature and cross-references NcLDS01
Literature Galagan J.E., et al., The genome sequence of the filamentous fungus Neurospora crassa. Nature 422:859-868(2003).
Protein ref. UniProtKB:   Q7S550
DNA ref. JGI genome:   supercont10.7 (174495..178098)
Protein sequence: NcLDS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1134
PWM (Da):   %s   125804.58  
PI (pH):   %s   7.18
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSHQNGTNGHSASTSDNGKESKSRNVIGPDPKAERTASMAKPRPTSMKLPFTGASRQGVENAFERHRQTIQSAVQPLPTQQGAGTFSENKKWGKLSSDLMTLRWADIKTLKHMVVAKIK
GERLADDKTMIMEKVIQLVSNLPSNSKLRVELTNGFLGELWYTLEHPPSIYVGEYYQYRKADGSCNIMFPQLGAAGTTYARSVRPNVIRQGALPDPELIFDSVMKRTEYKSHPNNVSSIL
WYWASIIIHDLFWTDYRDMSKSKTSSYLDLSPLYGSNQDMQDTIRTFKDGKLKVDCYADKRLLGMPPGVSVLLIFFNRFHNYTCDNLIAINEDGRFNKPSPKLEGEKAEAAWKKYDNDLF
QTARLITSGLYINITLLDYVRNIVNLNRVDTTWTLDPRADTGIDVGTKDGAERGTGNVVSAEFNLCYRWHSCISAKDEAWIEDFYYELFGKPGSDLSFHELIMGFGKFEGGIPADPADRP
IRKDKGHFSRDANGKISDDELAECIADAIEDPAGSFGAKNVPPSMRAVEILGIIQGRKWNLAGLNEFRKHFGLKPYETFEDINSDPGVSEALRRLYDHPDFVELYPGIVAEEHKSPMVPG
VGIAPTYTISRVVLSDAVCLVRGDRHYTIDYNPRNLTNWGYNEVQYDLNLKHGCVFYKLFMRALPNHFKENSVYAHYPMVTPAENKKILTDLKRDHLFDWARPTRQPKPHQVKTHAGAQH
VLDNDKEGTSGAYMSSWHAGLESLLGKPLSNNNPDAHDSQRRDIHEQLYSAEWADQVKAFFAQTTDALLAGESYNVGGHLLVDLVRDVGNIVPTLFAAKVFGISLQTKNNTNGLYTPQEL
YAVLAVIFAAIFYDHDPVKTHQLRDAARTVATQLGTALESAVKSQTSFFGSLLGGGGSGSNNNALTAYGNDLVKRLSKAGLSASDVAFGQVLPIVASSVPSIAEAFASAADFYLGEKGQA
HLGAIQELARQPASASADAQLLGYVLEGIRLSGNALGAFRQASAVDAIKEEDGSEVRVQPGDRVFVSVKSAAQSPTTFPSPEEVNPSRPLEAYKIFFFGTHSYLGHEVSQIALREMFRSL
FKRSNVRRAPGPQGQLKKITRELNEELSQTFYLREDWGAVTPFPVTMKVTWDE*

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 7, 3 introns) and 10 ESTs. Strain="ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987" and "wild type". Regions: 178-645 peroxidase domain; 692-1101 "CypX" Cytochrome P450
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAGCCATCAGAATGGCACAAACGGCCACTCGGCCAGCACCAGCGACAATGGCAAGGAGTCCAAGAGTCGAAACGTCATCGGCCCCGACCCCAAGGCCGAGAGGACGGCTAGCATG
GCCAAGCCCAGACCTACCTCGATGAAGCTTCCCTTTACCGGCGCCAGCCGACAAGGAGTAGAGAATGCGTTTGAGAGGCACAGGCAGACCATCCAGTCCGCTGTCCAGCCGCTGCCTACC
CAGCAAGGCGCGGGCACTTTCAGCGAGAACAAGAAATGGGGCAAGCTCAGCAGTGACTTGATGACCCTTCGATGGGCAGAGGTAAGTTGTGTCTGTCGTCATCACGGGATTATGGCCAGC
CAATGCTAACAACATGCCTACCAGACATCAAGACCCTGAAGCACATGGTAGTGGCCAAGATCAAGGGCGAGAGGCTCGCAGATGACAAGACCATGATCATGGAAAAGGTCATCCAGCTGG
TCTCTAACCTCCCCAGCAACTCCAAGCTACGAGTCGAGTTGACCAACGGCTTCTTGGGTGAGCTGTGGTACACACTCGAGCATCCTCCCTCGATATACGTGGGCGAGTATTACCAGTACA
GAAAGGCCGATGGTTCTTGCAACACGTATGTATTGTCCTCATCAACCCCAAGAACTTGACAGATTGCTGACACATGGATACAGAACATCATGTTCCCCCAGCTCGGTGCTGCCGGCACCA
CGTATGCGCGGTCTGTGAGGCCCAACGTCATCAGGCAGGGCGCTCTTCCCGACCCGGAACTCATCTTCGACTCGGTCATGAAGCGCACCGAGTACAAGTCGCACCCCAACAACGTGTCCA
GCATCCTGTGGTACTGGGCCAGCATCATCATCCACGATCTGTTCTGGACCGACTACCGTGACATGAGCAAGTCCAAGACGTCTTCCTACCTCGACCTGTCGCCGCTGTACGGCAGCAACC
AGGACATGCAGGACACGATCCGTACCTTCAAGGACGGTAAGCTCAAGGTGGACTGCTACGCCGACAAGCGCCTGCTGGGCATGCCTCCCGGCGTCAGCGTGCTGCTCATCTTCTTCAACC
GGTTCCACAACTACACGTGCGACAACCTGATTGCCATCAACGAGGACGGCCGGTTCAACAAGCCGTCGCCCAAGCTCGAGGGCGAGAAGGCTGAGGCGGCGTGGAAGAAGTACGACAACG
ACTTGTTCCAGACGGCCAGACTCATCACTTCGGGTCTGTACATCAACATCACCCTGCTCGACTACGTGCGCAACATTGTCAACCTCAACCGGGTCGACACCACGTGGACGCTCGACCCCC
GTGCCGACACGGGCATTGACGTGGGCACCAAGGACGGTGCGGAGCGCGGTACCGGCAACGTGGTCTCGGCCGAGTTCAACCTTTGCTACCGGTGGCACTCGTGCATCTCGGCCAAGGACG
AGGCCTGGATCGAGGATTTCTACTACGAGCTCTTTGGCAAGCCCGGCAGCGACCTCAGCTTCCACGAGCTGATCATGGGCTTCGGCAAGTTTGAGGGCGGGATTCCTGCGGATCCGGCCG
ACCGGCCCATTCGCAAGGACAAGGGCCACTTCAGCCGCGACGCCAACGGCAAGATCAGCGACGACGAGCTGGCCGAGTGCATCGCCGACGCCATTGAGGATCCCGCCGGTTCCTTTGGCG
CCAAGAACGTGCCTCCTTCCATGCGGGCCGTCGAGATCCTCGGTATCATCCAGGGCCGCAAATGGAACCTGGCCGGCCTGAACGAGTTCCGCAAGCACTTTGGCCTCAAGCCGTACGAGA
CCTTTGAGGACATCAACTCGGACCCGGGTGTGTCCGAGGCTCTTCGTAGGCTGTACGACCACCCGGACTTTGTCGAGCTGTACCCTGGTATCGTCGCTGAAGAGCACAAGTCGCCCATGG
TTCCCGGCGTGGGCATCGCGCCGACCTACACCATCTCGCGCGTGGTGCTGTCGGACGCCGTCTGTCTCGTCCGTGGCGACCGCCACTACACCATCGACTACAACCCGCGCAACCTGACCA
ACTGGGGCTACAACGAGGTGCAGTACGACCTGAACCTCAAACACGGCTGCGTCTTCTACAAGCTCTTCATGCGCGCCCTGCCCAACCACTTCAAGGAAAACTCGGTGTATGCGCACTACC
CGATGGTAACCCCCGCAGAGAACAAGAAGATCCTCACGGACCTCAAGCGCGACCACCTCTTTGACTGGGCCCGGCCCACCCGCCAACCCAAGCCGCACCAGGTGAAGACGCACGCGGGCG
CCCAGCACGTGCTCGACAACGACAAGGAGGGCACGAGCGGCGCGTACATGTCCTCATGGCACGCCGGTCTCGAGTCCCTCCTCGGCAAACCCCTCAGCAACAACAACCCCGACGCCCACG
ACAGCCAACGCCGCGACATCCACGAGCAGCTGTACAGCGCCGAGTGGGCCGACCAAGTCAAGGCCTTTTTCGCGCAGACCACTGACGCCCTCCTGGCCGGGGAGAGCTACAACGTCGGCG
GCCACCTGCTCGTCGACCTCGTCCGCGACGTTGGCAACATTGTGCCTACCCTGTTCGCCGCCAAGGTGTTTGGCATTTCCCTGCAGACCAAGAACAACACCAATGGGCTGTACACTCCGC
AGGAACTGTATGCCGTGCTAGCTGTCATTTTCGCCGCCATCTTCTACGACCACGACCCCGTCAAGACGCATCAGCTGCGTGACGCGGCCCGCACGGTGGCGACGCAGCTCGGTACCGCTT
TGGAGAGCGCCGTCAAGAGCCAGACTTCCTTCTTTGGGTCGCTTCTTGGTGGTGGTGGTAGCGGTAGCAACAATAACGCGCTGACTGCGTATGGCAACGACCTCGTCAAGCGGTTGTCCA
AGGCTGGGCTGAGCGCGTCGGATGTTGCGTTTGGTCAGGTGTTGCCGATCGTGGCGTCGAGCGTGCCGAGTATTGCCGAGGCGTTCGCGAGCGCGGCGGACTTTTATCTCGGTGAGAAGG
GACAGGCGCACTTGGGTGCCATTCAGGAGCTGGCGAGGCAGCCGGCGAGTGCGAGCGCGGATGCGCAGTTGCTTGGGTACGTGTTGGAGGGCATTCGGTTGTCGGGCAACGCTTTGGGGG
CGTTCAGGCAGGCGAGTGCGGTGGATGCCATCAAGGAGGAGGATGGCAGCGAGGTGAGGGTGCAGCCTGGTGATAGGGTGTTTGTTAGCGTGTGGTAAGTTTTGATCTCCCTTCCCTTTT
CCCCCTCTCGTTACCTAGTGATGGAAGAAATGATACTAACAGACGAAAACAGAAATCCGCGGCCCAGTCACCAACCACCTTCCCCAGCCCCGAGGAAGTCAACCCGTCCCGCCCGCTGGA
GGCCTACAAAATCTTCTTCTTCGGCACGCACTCGTACCTTGGTCACGAGGTCAGCCAGATTGCGCTTAGGGAAATGTTCCGCAGCTTGTTCAAGCGGAGCAACGTCCGTCGGGCGCCCGG
CCCCCAGGGCCAGCTGAAGAAGATCACGAGGGAGTTGAATGAGGAGCTGAGCCAGACGTTCTACCTCCGCGAGGACTGGGGTGCTGTGACGCCGTTCCCCGTGACCATGAAGGTTACTTG
GGATGAGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCAGCCATCAGAATGGCACAAACGGCCACTCGGCCAGCACCAGCGACAATGGCAAGGAGTCCAAGAGTCGAAACGTCATCGGCCCCGACCCCAAGGCCGAGAGGACGGCTAGCATG
GCCAAGCCCAGACCTACCTCGATGAAGCTTCCCTTTACCGGCGCCAGCCGACAAGGAGTAGAGAATGCGTTTGAGAGGCACAGGCAGACCATCCAGTCCGCTGTCCAGCCGCTGCCTACC
CAGCAAGGCGCGGGCACTTTCAGCGAGAACAAGAAATGGGGCAAGCTCAGCAGTGACTTGATGACCCTTCGATGGGCAGACATCAAGACCCTGAAGCACATGGTAGTGGCCAAGATCAAG
GGCGAGAGGCTCGCAGATGACAAGACCATGATCATGGAAAAGGTCATCCAGCTGGTCTCTAACCTCCCCAGCAACTCCAAGCTACGAGTCGAGTTGACCAACGGCTTCTTGGGTGAGCTG
TGGTACACACTCGAGCATCCTCCCTCGATATACGTGGGCGAGTATTACCAGTACAGAAAGGCCGATGGTTCTTGCAACAACATCATGTTCCCCCAGCTCGGTGCTGCCGGCACCACGTAT
GCGCGGTCTGTGAGGCCCAACGTCATCAGGCAGGGCGCTCTTCCCGACCCGGAACTCATCTTCGACTCGGTCATGAAGCGCACCGAGTACAAGTCGCACCCCAACAACGTGTCCAGCATC
CTGTGGTACTGGGCCAGCATCATCATCCACGATCTGTTCTGGACCGACTACCGTGACATGAGCAAGTCCAAGACGTCTTCCTACCTCGACCTGTCGCCGCTGTACGGCAGCAACCAGGAC
ATGCAGGACACGATCCGTACCTTCAAGGACGGTAAGCTCAAGGTGGACTGCTACGCCGACAAGCGCCTGCTGGGCATGCCTCCCGGCGTCAGCGTGCTGCTCATCTTCTTCAACCGGTTC
CACAACTACACGTGCGACAACCTGATTGCCATCAACGAGGACGGCCGGTTCAACAAGCCGTCGCCCAAGCTCGAGGGCGAGAAGGCTGAGGCGGCGTGGAAGAAGTACGACAACGACTTG
TTCCAGACGGCCAGACTCATCACTTCGGGTCTGTACATCAACATCACCCTGCTCGACTACGTGCGCAACATTGTCAACCTCAACCGGGTCGACACCACGTGGACGCTCGACCCCCGTGCC
GACACGGGCATTGACGTGGGCACCAAGGACGGTGCGGAGCGCGGTACCGGCAACGTGGTCTCGGCCGAGTTCAACCTTTGCTACCGGTGGCACTCGTGCATCTCGGCCAAGGACGAGGCC
TGGATCGAGGATTTCTACTACGAGCTCTTTGGCAAGCCCGGCAGCGACCTCAGCTTCCACGAGCTGATCATGGGCTTCGGCAAGTTTGAGGGCGGGATTCCTGCGGATCCGGCCGACCGG
CCCATTCGCAAGGACAAGGGCCACTTCAGCCGCGACGCCAACGGCAAGATCAGCGACGACGAGCTGGCCGAGTGCATCGCCGACGCCATTGAGGATCCCGCCGGTTCCTTTGGCGCCAAG
AACGTGCCTCCTTCCATGCGGGCCGTCGAGATCCTCGGTATCATCCAGGGCCGCAAATGGAACCTGGCCGGCCTGAACGAGTTCCGCAAGCACTTTGGCCTCAAGCCGTACGAGACCTTT
GAGGACATCAACTCGGACCCGGGTGTGTCCGAGGCTCTTCGTAGGCTGTACGACCACCCGGACTTTGTCGAGCTGTACCCTGGTATCGTCGCTGAAGAGCACAAGTCGCCCATGGTTCCC
GGCGTGGGCATCGCGCCGACCTACACCATCTCGCGCGTGGTGCTGTCGGACGCCGTCTGTCTCGTCCGTGGCGACCGCCACTACACCATCGACTACAACCCGCGCAACCTGACCAACTGG
GGCTACAACGAGGTGCAGTACGACCTGAACCTCAAACACGGCTGCGTCTTCTACAAGCTCTTCATGCGCGCCCTGCCCAACCACTTCAAGGAAAACTCGGTGTATGCGCACTACCCGATG
GTAACCCCCGCAGAGAACAAGAAGATCCTCACGGACCTCAAGCGCGACCACCTCTTTGACTGGGCCCGGCCCACCCGCCAACCCAAGCCGCACCAGGTGAAGACGCACGCGGGCGCCCAG
CACGTGCTCGACAACGACAAGGAGGGCACGAGCGGCGCGTACATGTCCTCATGGCACGCCGGTCTCGAGTCCCTCCTCGGCAAACCCCTCAGCAACAACAACCCCGACGCCCACGACAGC
CAACGCCGCGACATCCACGAGCAGCTGTACAGCGCCGAGTGGGCCGACCAAGTCAAGGCCTTTTTCGCGCAGACCACTGACGCCCTCCTGGCCGGGGAGAGCTACAACGTCGGCGGCCAC
CTGCTCGTCGACCTCGTCCGCGACGTTGGCAACATTGTGCCTACCCTGTTCGCCGCCAAGGTGTTTGGCATTTCCCTGCAGACCAAGAACAACACCAATGGGCTGTACACTCCGCAGGAA
CTGTATGCCGTGCTAGCTGTCATTTTCGCCGCCATCTTCTACGACCACGACCCCGTCAAGACGCATCAGCTGCGTGACGCGGCCCGCACGGTGGCGACGCAGCTCGGTACCGCTTTGGAG
AGCGCCGTCAAGAGCCAGACTTCCTTCTTTGGGTCGCTTCTTGGTGGTGGTGGTAGCGGTAGCAACAATAACGCGCTGACTGCGTATGGCAACGACCTCGTCAAGCGGTTGTCCAAGGCT
GGGCTGAGCGCGTCGGATGTTGCGTTTGGTCAGGTGTTGCCGATCGTGGCGTCGAGCGTGCCGAGTATTGCCGAGGCGTTCGCGAGCGCGGCGGACTTTTATCTCGGTGAGAAGGGACAG
GCGCACTTGGGTGCCATTCAGGAGCTGGCGAGGCAGCCGGCGAGTGCGAGCGCGGATGCGCAGTTGCTTGGGTACGTGTTGGAGGGCATTCGGTTGTCGGGCAACGCTTTGGGGGCGTTC
AGGCAGGCGAGTGCGGTGGATGCCATCAAGGAGGAGGATGGCAGCGAGGTGAGGGTGCAGCCTGGTGATAGGGTGTTTGTTAGCGTGAAATCCGCGGCCCAGTCACCAACCACCTTCCCC
AGCCCCGAGGAAGTCAACCCGTCCCGCCCGCTGGAGGCCTACAAAATCTTCTTCTTCGGCACGCACTCGTACCTTGGTCACGAGGTCAGCCAGATTGCGCTTAGGGAAATGTTCCGCAGC
TTGTTCAAGCGGAGCAACGTCCGTCGGGCGCCCGGCCCCCAGGGCCAGCTGAAGAAGATCACGAGGGAGTTGAATGAGGAGCTGAGCCAGACGTTCTACCTCCGCGAGGACTGGGGTGCT
GTGACGCCGTTCCCCGTGACCATGAAGGTTACTTGGGATGAGTAG

Retrieve as FASTA