1. Browse the Database
  2. View Redoxidase
Entry information : RdPGHS01 (RosdCyOX)
Entry ID 5312
Creation 2007-05-03 (Marcel Zamocky)
Last sequence changes 2007-05-03 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-09-11 (Christophe Dunand)
Peroxidase information: RdPGHS01 (RosdCyOX)
Name (synonym) RdPGHS01 (RosdCyOX)
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhodobacteraceae Roseobacter
Organism Roseobacter denitrificans    [TaxId: 2434 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RdPGHS01
start..stop		 S start..stop
NmuPGHS02 563 0 10..519 12..525
RsphPGHS02 448 1.43e-153 6..517 20..543
MvaPGHS01 335 1.54e-109 20..517 34..525
NOpuPGHS01 328 1.05e-106 26..501 41..529
Literature and cross-references RdPGHS01 (RosdCyOX)
Literature Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H., Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K., O'Huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T., Touchman J.W.;
"The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism.";
J. Bacteriol. 189:683-690(2007); Zamocky M. et al. (2007) Phylogenetic relationship in the peroxidase-cyclooxygenase superfamily (in preparation).
Protein ref. GenPept:   ABG30731 UniProtKB:   Q16BB2
DNA ref. GenBank:   CP000362 (1029242..1030804)
Protein sequence: RdPGHS01 (RosdCyOX)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   520 (319)
PWM (Da):   %s   58757.06 (34779.9) Transmb domain:   %s   i13-35o
PI (pH):   %s   7.06 (4.40) Peptide Signal:   %s   cut: 24 range:24-342
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSRIPYSVQK FQFSIAEAIP PLATLVNRFA INRVVKRART RPHPLSTERD YVSWSGLTDK RWSARHLPPQ TRDNLPEPEV LQELFRRREG TQRLCPKSTC LFPAFAQYLT DGFIRTESEH  LTPEGQDPKL HLKRNTSNHD IDMCTLYGRT PAQTDALRLK SSDPGLKGRL KSQMIGDEEY PPFLYRDGAP DPDFAVLDPP LGGADQSPEK QAKLFAVGGD RVNSVPQVAM LNTLFLREHN  RLAGEIEAAH PDWDDDRVFE TARNTVIVIF IKIIVEDYIN HISPLPFTLR ADPSVAWNAP WNKPNWITTE FSLLYRWHAL IPDKIRWGDD LHPVHTTFMN NDLLIRHGLL KGFAGICATQ  AAELGPRNTA EPLLKVELDS IKQDRFCQLA GFSDYCNYMS QNRPVSFRAI SSDPEVSDAL ARHYDGPRDV DLHVGLFCED RVPNSPLPNL ILVFVALDAF SQALTNPLLS QHVFKRSTFS 
APGWSAIRQT QTLRDVLERN VTGGVGDTFI AMTRKEWVPE 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain=" ATCC 33942 /OCh 114".