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Entry information : GmoLDS02
Entry ID 5378
Creation 2007-05-17 (Christophe Dunand)
Last sequence changes 2007-05-17 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Marcel Zamocky
Last annotation changes 2007-06-12 (Marcel Zamocky)
Peroxidase information: GmoLDS02
Name GmoLDS02
Class Linoleate diol synthase (PGHS like)     [Orthogroup: LDS001]*
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Nectriaceae Gibberella
Organism Gibberella moniliformis (Fusarium verticillioides)    [TaxId: 117187 ]
Cellular localisation N/D
Tissue type Mycelium
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GmoLDS02
start..stop		 S start..stop
GzLDS02 2138 0 1..1151 1..1151
AalcLDS02 1747 0 1..1150 1..1153
AflLDS02 1155 0 6..1133 160..1246
AteLDS02 1142 0 6..1114 91..1134
Literature and cross-references GmoLDS02
Literature REFERENCE 1 Brown DW et al., Comparative analysis of 87,000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides. Fungal Genet. Biol. 42 (10), 848-861 (2005).
REFERENCE 2 Birren et al., The Genome Sequence of Gibberella moniliformis (Fusarium verticillioides) 7600
DNA ref. GenBank:   AAIM02000117
Cluster/Prediction ref. UniGene:   Gmo.4452
Protein sequence: GmoLDS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1153 (372)
PWM (Da):   %s   128715.18 (41000.5)  
PI (pH):   %s   7.36 (6.68) Peptide Signal:   %s   cut: 27 range:22-393
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSFNEKFQAG ESYGDSKEDP ASLLNNPEKL VADLMKDYAG VRSQASPAQL LGLVKELLQK GQPLDDKKGC RTTELLIGIL TALPASSKAR TALTNKLIDT LWGNLQHPPL SYVGGDVKYD  VVNSDKPAHK HNCELYDTIE FKVPGTDVLL REQVPQAPDG LHQYRMPDGS FNNILEPNLG RAGTPYAKSV KSEKRLHGVK PDPGLLFDLL MARDETTFQE NPAGISSMLF YHAAIIIHDI  FRTNRTDMNK SDTSSYLDLA PLYGSSLKDQ LEIRTMKEGK LKPDTFHEKR LLGQPAGVNV MLVLYSRFHN YVADILLKIN ENGRFSMSVP PNASEEEKAK AIAKQDHDLF NVARLITGGL  YINICLHDYL RAITNTHHSA SDWTLDPRVA IDKQFDGDGV PRGVGNQVSV EFNLLYRFHS CISKRDEKWI NNFFLKLFPG RKAEDLQDVS WTELGQALLT FEQNTPKDPS VRTFDGLERQ  ADGTFKDEDL VRILKDAMED PAGTFGARMV PKALKVVEVL GIIQGRKWQC ASLNEFREFF GLKRYDSFSD INSNPDIANI LEKLYTDPDM VELYPGLMIE DIKPQRNPGS GIMPTYSVGR  AVLSDAVTLV RSDRFNTIDY TVSNLTAWGY NEVQQDYKTL GGSMLYKLIQ RGVPNWFPFN SIAVMQPMYT KKANEQIAKE IGTFDQYTLD DPKTPPKVAV LTSGPAIKQI LSNTKQYVTP  WLKPLNTLFP GKKDFGWFML AGDQPQNYSH RANFAKAMSK IPNMHNAVHA FIEREGTKLI NKETFTLKKG LDQIDIIRDV AIPLNTQLLA DLFYFDLRTD ENPDGKLGVA ELYRSLLDIR  VWGVNNNDPA QAWNRRRRAQ EGAKRMIETT KTIVAEADAG RSRGIGLVNA VANRIGARSY LKKDSLRSCG LKLVEELLAQ GNNVDQVTDN LWLTAFGGIG VPVTAFYEVL SFFLRPENEA  IWAEVQAIAQ KGDDATLHAY VAEAQRMTSS QRNVRVATAP GEVQGQTIQP GTAVVLMLGE AGRNPKEVPD AGKFNPQRKK EDVSAFSYGQ HECIAKDVAL AFVTGLIKLV ADLKELRPAP 
GQMGTVKTIQ VGTEKAYLND SWSYLGFDAS TWKVHFNGHG KGKFEGERVP TKSTPIQEYY YLLQKRKDEI LGK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (Chromo 5, 4 introns), 14 ESTs (DR646425 (5'end) is not in the Unigene. The C-Term end is uncorrectly predicted with FGENESH, correct prediction using ESTs. Contig position: 867510-863861. Strain="7600" and "m3125". Fusion with cytochrome P450, probleme with alternative introns
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