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Entry information : OsRboh04(LOC_Os05g38980 / OsNox04 / OsRbohD)
Entry ID 5568
Creation 2007-07-19 (Christophe Dunand)
Last sequence changes 2007-07-19 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2022-02-28 (Christophe Dunand)
Peroxidase information: OsRboh04(LOC_Os05g38980 / OsNox04 / OsRbohD)
Name OsRboh04(LOC_Os05g38980 / OsNox04 / OsRbohD)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh003]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue types Flowers
Inflorescences
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsRboh04
start..stop		 S start..stop
ZmRboh09 1454 0 19..819 20..822
ZmRboh15 1449 0 19..819 20..821
BdiRboh09 1441 0 2..819 5..835
SbRboh04 1440 0 24..819 28..827
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 22715144..22715444 299 N° 2 22716245..22716407 161 N° 3 22716484..22716532 47 N° 4 22716626..22716739 112
N° 5 22716812..22717234 421 N° 6 22717307..22717693 385 N° 7 22717777..22717872 94 N° 8 22717978..22718093 114
N° 9 22718170..22718272 101 N° 10 22718392..22718480 87 N° 11 22718586..22718736 149 N° 12 22718817..22718966 148
N° 13 22719057..22719185 127 N° 14 22719276..22719354 77 N° 15 22719435..22719544 108  
join(22715144..22715444,22716245..22716407,22716484..22716532,22716626..22716739 ,22716812..22717234,22717307..22717693,22717777..22717872,22717978..22718093,227 18170..22718272,22718392..22718480,22718586..22718736,22718817..22718966,2271905 7..22719185,22719276..22719354,22719435..22719544)


exon

Literature and cross-references OsRboh04(LOC_Os05g38980 / OsNox04 / OsRbohD)
Literature IRGSP(International Rice Genome Sequencing Project). Oryza sativa nipponbare(GA3) genomic DNA, chromosome 5. Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
DNA ref. GenBank:   NC_008398.1 (22715144..22719541)
mRNA ref. GenBank:   AK072353
Cluster/Prediction ref. UniGene:   Os.53380
Protein sequence: OsRboh04(LOC_Os05g38980 / OsNox04 / OsRbohD)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   819
PWM (Da):   %s   92143.25 Transmb domain:   %s   o268-287i401-423o449-471i636-653o
PI (pH):   %s   9.42
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGDYVDVPLGGGGQSTLPPVAPLKKQPSRLASGMKRLASMVPDTMKLKRTHSSAQPALRGLRFLDKTSAGKDGWKNVEKRFDEMSADGRLPQESFAKCIGMADSKEFASEVFVALARRR
SIKPEDGITKEQLKEFWEELTDQNFDSRLRIFFDMCDKNGDGQLTEDEVKVIVLSAAANKLAKLKSHAATYASLIMEELDPDHRGYIEIWQLETLLRGMVTAQGPPEKVKLASASLARTM
VPSSHRSPMQRRFNKTVDFIHENWKRIWVLSLWAILNIALFMYKFVQYSRRDAFQVMGYCVCIAKGAAETLKLNMAVILLPVCRNTLTRLRSTALSKVVPFDDNINFHKVIALTIAIGAA
THTLAHVTCDFPRLVSCPRDKFEATLGPYFNYVQPTYSSLVASTPGWTGILMILIMSFSFTLATHSFRRSVVKLPSPLHHLAGFNAFWYAHHLLVIAYILLVLHSYFIFLTKQWYNRTTW
MFLAVPVLFYSCERTIRRVRESSYGVTVIKAAIYPGNVLSIHMNKPSSFKYKSGMYMFVKCPDVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTTELRNLFGACEAQVSSKKATLARLET
TIIADGLKEETCFPKVFIDGPFGAPAQNYKKYDILLLIGLGIGATPFISILKDLLNNIKSNDVQSTHDAELGCTFKSNGPGRAYFYWVTREQGSFEWFKGVMNDVAESDHDNVIEMHNYL
TSVYEEGDARSALIAMVQSLQHAKNGVDIVSGSKIRTHFARPNWRKVFSDLANAHQNSRIGVFYCGSPTLTKMLRDLSLEFSQTTTTRFHFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, introns), 2 mRNA and 17 ESTs. four SwissProt/TREMBL accessions: Q0DHH6 (DNA), A3BUB0 (uncorrect prediction confirmed with ESTs), Q6I5J8 (Partial prediction, 3' missing), Q6I5U1 (Partial prediction, 3' missing).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGGGGACTACGTGGACGTGCCGCTGGGCGGCGGCGGGCAGAGCACGCTGCCGCCGGTGGCGCCGCTGAAGAAGCAGCCGTCGCGGCTGGCGTCCGGGATGAAGCGGCTGGCGTCC
ATGGTGCCCGACACGATGAAGCTGAAGCGGACGCACTCCAGCGCGCAGCCGGCGCTGCGCGGCCTGCGCTTCCTCGACAAGACGTCGGCGGGGAAGGACGGGTGGAAGAACGTCGAGAAG
CGGTTCGACGAGATGAGCGCCGACGGACGCCTGCCCCAGGAGAGCTTCGCCAAATGCATCGCGGTGAGTGCTCCTGCACATGCCCCCATGGTGTTCTCCATCCTCCAAAGTGATTAGTGA
TTCACCACAGCATGAAAAGAGAGACGGTGAAATTGCATTGTTAGCAAGAACACATCGAAAATTGACAAGCTTTGTTTTCCCTGCAAAAAAAAAAGGGGAAAATGTTGTCAAAGCTTTTGT
GCATGTGATGGAAAAAGGGGAACAGTTAGTAGATGAGAAATTGGTACAGATCATTCCTAGCTCGTATGTCGATGGTGTTTGTCCAAAATTTCAGCCATTTCAACTGTTTAAGCAGCCAGC
CTCCTCCTGCCATCCATGCATACATGTTTGCAGCACTTCTTTGATAAAGTATACATAATCATTCCTATTCACAATTTTATTTTAACAAAAAACGGAGGAAAGAAAATTGGAAAATTTAAG
AGGATATAATTGGTCGACCACGGGTTGCACAAAGTTCAGACTTTGGCCCCCCCAAATATAACTCGGAGACAATACTTACCACGTAGCAAGAATAGGATATACTTCCTCCGTTTCATAATG
TAAGACTTTCAATCATTGCCCACATTCATATAGATGTTAATGAATCTAGACATATATATATGTGTATAGATTCATTAACATCTATATGAATATGGGCAATGCTAGAAAGTCTTACAATAT
GAAACGGAGGGAGTACTCGTGCTTACGACATTTTCTTTTAAAAGAAGTGTAGTCAGGTAAATAAATGACATCAGAATAGCAATAAATCCATCCTCTGTATATAAATTGAAGCTCTAAGCT
TAGAATGCCTCTGCAACTTAAAGGTATGGCGGATTCTAAGGAGTTTGCAAGCGAGGTGTTTGTGGCATTGGCGAGAAGGAGGAGCATCAAACCAGAAGATGGGATAACAAAGGAACAGCT
GAAAGAATTTTGGGAGGAGTTGACTGATCAGAACTTTGATTCACGACTACGAATATTCTTTGACATATGTAAAGGTCTACCTTCCTTGTCTTCAATGGAAAAAACCTTATGACTTGCCCC
TTGATGAGATTGCTTTGCAATCAGGTGTGACAAGAATGGTGATGGGCAGCTTACAGAGGACGAGGTCAAAGAGAGGTCAGTTCCCAATCATCTCTGAATTTACCTTTTTTCCACAAAGCT
TGTGGAAATGATCTCAATAAGAATTTACCTTTCTCTTTCCATATGCAGGTTATTGTGTTGAGTGCCGCAGCAAACAAACTTGCCAAGTTGAAAAGCCATGCTGCAACCTACGCCTCACTG
ATCATGGAAGAGCTGGATCCTGATCATCGCGGTTACATTGAGAGGTACCAAGACATGAAATTATCTCCCTTTTTTTTGACAAACAGCAGCATACAGATATGCTTGTCTCAATGCAGATTT
GGCAGCTGGAGACGCTACTCCGTGGTATGGTGACAGCCCAAGGGCCTCCAGAGAAGGTGAAGCTGGCTTCAGCAAGCCTTGCAAGGACAATGGTCCCTTCCAGTCACCGGAGTCCAATGC
AGAGGCGTTTCAACAAGACTGTTGACTTCATCCATGAGAATTGGAAGAGGATATGGGTGCTCTCCTTGTGGGCGATCCTCAATATTGCATTATTCATGTACAAGTTTGTGCAGTACAGTA
GGCGGGATGCATTTCAGGTGATGGGCTACTGTGTCTGCATAGCAAAGGGTGCTGCCGAAACACTCAAGCTGAACATGGCCGTTATACTCCTCCCGGTGTGCCGAAACACACTAACAAGGC
TCCGATCAACAGCACTCAGCAAAGTCGTACCATTTGATGATAACATAAACTTCCACAAGAGGTACACGTGTGGAACTCTTTGCCATTTCCAGGATTACACAGCCTGACCTCTTTGTTCTG
ATCACCATATCAGGTTATCGCACTGACGATTGCAATTGGAGCGGCTACTCATACTCTTGCTCATGTAACCTGCGACTTCCCAAGATTGGTATCATGTCCAAGGGACAAGTTCGAGGCCAC
ACTGGGGCCTTACTTCAACTATGTTCAACCAACATACTCATCGCTGGTTGCAAGCACTCCAGGGTGGACTGGCATCCTCATGATCTTGATAATGTCATTCTCGTTCACACTTGCGACACA
TTCGTTCAGGAGGAGCGTTGTGAAGCTTCCATCACCACTGCACCACCTTGCTGGTTTCAATGCCTTTTGGTACGCCCATCACCTACTGGTGATTGCATATATCCTCTTGGTGCTGCACTC
CTACTTCATATTTCTCACCAAGCAGTGGTACAATCGAACGCGGTATTTCTCTGGCATATGTTTGGCACAACTATTTCTTTTGTGAATTCAGTGGTTGTGCATAATATTGACGCTTGTGTT
TACAGACGTGGATGTTCTTGGCAGTTCCAGTCCTCTTTTACTCCTGCGAGAGAACTATCAGAAGAGTTCGTGAGAGCAGTTATGGGGTGACCGTCATCAAGAGGTAAGCAACATATTTCA
CATGAATTGCACGATGAGTATTTTCAATTTATTCTAGCTTCTAAGTGTACAAGAATACCATTAATTGACTATCAAATGTGCCATGCAGGCAGCAATTTACCCTGGAAATGTGCTCTCTAT
TCACATGAATAAACCATCAAGTTTCAAGTACAAAAGTGGGATGTATATGTTTGTAAAATGCCCAGATGTTTCGCCTTTTGAATGTGGTACCATCTGATCGTCTCTGTCCAAATGTCAGTG
TTTATCCAGGCTATGGATTAATAGATTCTTCAATGCTTCCAGGCATCCCTTCTCCATAACTTCTGCACCTGGAGATGACTACTTGAGTGTTCATATCCGTACATTAGGTGACTGGACAAC
AGAACTTAGAAACCTATTTGGGAAGAGGTCAGTTGAGCAAACAGAAACAAAAAGAAAAGGAGAATAGTTCAGGCATAATGGGAGCTTATGCAGTATTTATATGCTAAATTAACAAAGTTG
CTAAAGGGTTATGCTAATTCATGCAGGCTTGTGAGGCACAAGTAAGTTCCAAGAAGGCTACACTTGCACGACTTGAAACCACTATCATAGCAGATGGTCTGAAAGAGGAGACTTGTGGTA
ATTATGCCCTGTTTGTTTCATATTCTACATTCATCTACTTTTTGAAGGAATTTCTATACAATTGTTTCACTAATCTTCCTGACTTTGGTTCTCTTCATTTAGCTTTCCCAAAGTCTTTAT
AGATGGTCCTTTCGGCGCACCAGCTCAAAATTACAAGAAATATGACATTCTTTTGCTTATCGGGCTTGGAATTGGAGCAACGCCTTTCATCAGCATACTGAAGGATCTCCTGAACAACAT
AAAATCCAATGGAGAGTAAACTGCTTAACTATAGCAAATTCTTTCTTATACAGTAAACCAAGTGCATAATATCTAAAGTGAATTGGATTCAACAGGATGTGCAAAGCACGCATGATGCTG
AGTTAGGCTGCACCTTTAAGAGCAATGGGCCAGGAAGAGCTTATTTCTACTGGGTCACCAGAGAGCAAGGTTCCTTTGAATGGTTTAAAGGCGTGATGAATGATGTTGCTGAAAGTGATC
ATGATATGTACTACTCAGTCTAACTGCTTCAGTGCAACTTCCATGTTCTCTCCTTCAGATTAATAAATAGATACTAACATAATCACTCACTATACAGAATGTAATAGAGATGCACAATTA
CCTGACAAGCGTGTATGAAGAAGGAGATGCAAGATCAGCTCTGATTGCCATGGTCCAATCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCTGGCAGCAAGAGGTTTTTCCCACT
TCTATCCTCCTGCAAAAATAAAAATAAAAACTAAATCACATGTGCAAAATTTGATTCAATATTTCTCGCTTTATGCAGATCCGGACACATTTTGCAAGGCCGAACTGGAGAAAGGTATTC
TCAGATCTGGCCAATGCCCACCAGAACTCTCGTATAGAGGTCAGTTCTATGTGATAAATCTCAAGTGATGGTTCCTAGTTTACAGGATAGCAATGCTGAGATGTTTCATAAATCTGCAGG
CGTTTTCTACTGTGGGTCTCCAACACTTACGAAAATGCTGAGGGATCTTTCACTAGAATTCAGCCAGACGACAACGACTCGGTTCCATTTCCACAAGGAGAACTTCTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGGGGACTACGTGGACGTGCCGCTGGGCGGCGGCGGGCAGAGCACGCTGCCGCCGGTGGCGCCGCTGAAGAAGCAGCCGTCGCGGCTGGCGTCCGGGATGAAGCGGCTGGCGTCC
ATGGTGCCCGACACGATGAAGCTGAAGCGGACGCACTCCAGCGCGCAGCCGGCGCTGCGCGGCCTGCGCTTCCTCGACAAGACGTCGGCGGGGAAGGACGGGTGGAAGAACGTCGAGAAG
CGGTTCGACGAGATGAGCGCCGACGGACGCCTGCCCCAGGAGAGCTTCGCCAAATGCATCGGTATGGCGGATTCTAAGGAGTTTGCAAGCGAGGTGTTTGTGGCATTGGCGAGAAGGAGG
AGCATCAAACCAGAAGATGGGATAACAAAGGAACAGCTGAAAGAATTTTGGGAGGAGTTGACTGATCAGAACTTTGATTCACGACTACGAATATTCTTTGACATGTGTGACAAGAATGGT
GATGGGCAGCTTACAGAGGACGAGGTCAAAGAGGTTATTGTGTTGAGTGCCGCAGCAAACAAACTTGCCAAGTTGAAAAGCCATGCTGCAACCTACGCCTCACTGATCATGGAAGAGCTG
GATCCTGATCATCGCGGTTACATTGAGATTTGGCAGCTGGAGACGCTACTCCGTGGTATGGTGACAGCCCAAGGGCCTCCAGAGAAGGTGAAGCTGGCTTCAGCAAGCCTTGCAAGGACA
ATGGTCCCTTCCAGTCACCGGAGTCCAATGCAGAGGCGTTTCAACAAGACTGTTGACTTCATCCATGAGAATTGGAAGAGGATATGGGTGCTCTCCTTGTGGGCGATCCTCAATATTGCA
TTATTCATGTACAAGTTTGTGCAGTACAGTAGGCGGGATGCATTTCAGGTGATGGGCTACTGTGTCTGCATAGCAAAGGGTGCTGCCGAAACACTCAAGCTGAACATGGCCGTTATACTC
CTCCCGGTGTGCCGAAACACACTAACAAGGCTCCGATCAACAGCACTCAGCAAAGTCGTACCATTTGATGATAACATAAACTTCCACAAGGTTATCGCACTGACGATTGCAATTGGAGCG
GCTACTCATACTCTTGCTCATGTAACCTGCGACTTCCCAAGATTGGTATCATGTCCAAGGGACAAGTTCGAGGCCACACTGGGGCCTTACTTCAACTATGTTCAACCAACATACTCATCG
CTGGTTGCAAGCACTCCAGGGTGGACTGGCATCCTCATGATCTTGATAATGTCATTCTCGTTCACACTTGCGACACATTCGTTCAGGAGGAGCGTTGTGAAGCTTCCATCACCACTGCAC
CACCTTGCTGGTTTCAATGCCTTTTGGTACGCCCATCACCTACTGGTGATTGCATATATCCTCTTGGTGCTGCACTCCTACTTCATATTTCTCACCAAGCAGTGGTACAATCGAACGACG
TGGATGTTCTTGGCAGTTCCAGTCCTCTTTTACTCCTGCGAGAGAACTATCAGAAGAGTTCGTGAGAGCAGTTATGGGGTGACCGTCATCAAGGCAGCAATTTACCCTGGAAATGTGCTC
TCTATTCACATGAATAAACCATCAAGTTTCAAGTACAAAAGTGGGATGTATATGTTTGTAAAATGCCCAGATGTTTCGCCTTTTGAATGGCATCCCTTCTCCATAACTTCTGCACCTGGA
GATGACTACTTGAGTGTTCATATCCGTACATTAGGTGACTGGACAACAGAACTTAGAAACCTATTTGGGAAGGCTTGTGAGGCACAAGTAAGTTCCAAGAAGGCTACACTTGCACGACTT
GAAACCACTATCATAGCAGATGGTCTGAAAGAGGAGACTTGCTTTCCCAAAGTCTTTATAGATGGTCCTTTCGGCGCACCAGCTCAAAATTACAAGAAATATGACATTCTTTTGCTTATC
GGGCTTGGAATTGGAGCAACGCCTTTCATCAGCATACTGAAGGATCTCCTGAACAACATAAAATCCAATGGAGATGTGCAAAGCACGCATGATGCTGAGTTAGGCTGCACCTTTAAGAGC
AATGGGCCAGGAAGAGCTTATTTCTACTGGGTCACCAGAGAGCAAGGTTCCTTTGAATGGTTTAAAGGCGTGATGAATGATGTTGCTGAAAGTGATCATGATAATGTAATAGAGATGCAC
AATTACCTGACAAGCGTGTATGAAGAAGGAGATGCAAGATCAGCTCTGATTGCCATGGTCCAATCACTTCAACATGCCAAAAATGGTGTGGATATCGTCTCTGGCAGCAAGATCCGGACA
CATTTTGCAAGGCCGAACTGGAGAAAGGTATTCTCAGATCTGGCCAATGCCCACCAGAACTCTCGTATAGGCGTTTTCTACTGTGGGTCTCCAACACTTACGAAAATGCTGAGGGATCTT
TCACTAGAATTCAGCCAGACGACAACGACTCGGTTCCATTTCCACAAGGAGAACTTCTAA

Retrieve as FASTA