View Redoxidase 577

Entry information : GmPrx78 (Glyma12g33940.1)

Entry ID	577
Creation	2006-08-07 (Christophe Dunand)
Last sequence changes	2011-10-12 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2011-12-13 (Qiang Li)

Peroxidase information: GmPrx78 (Glyma12g33940.1)

Name (synonym)

GmPrx78 (Glyma12g33940.1)

Class

Class III peroxidase [Orthogroup: Prx018]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

Seedlings

Inducer

Salicylic acid treatment

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx78 start..stop	S start..stop
GmPrx89	492	2.52e-177	1..315	1..319
GmPrx34	478	4.3e-172	1..315	1..319
VvPrx20	471	3.76e-169	10..315	8..317
NtPrx84-1A	470	8.14e-169	1..315	1..319

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '577' 'join(37128883..37129098,37129883..37130074,37131574..37132110)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	37128883..37129098	214	N° 2	37129883..37130074	190	N° 3	37131574..37132110	535
join(37128883..37129098,37129883..37130074,37131574..37132110)

Literature and cross-references GmPrx78 (Glyma12g33940.1)

Literature	Tian,A.G., et al, Characterization of soybean genomic features by analysis of its expressed sequence tags.
DNA ref.	Phytozome 12: Gm12 (37128883..37132110)

Protein sequence: GmPrx78 (Glyma12g33940.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	315 (290)
PWM (Da):	33796.99 (31090.5)	Transmb domain:	i40-59o
PI (pH):	5.85 (5.36)	Peptide Signal:	cut: 26 range:26-315

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAPLLRTLFFVALSILSLLACFTNAQLSTNFYDKTCPNLQTIVKN
AMQQAINGEARLGASILRLFFHDCFVNGCDASILLDDTATFVGEKNALPNRNSVRGYEVIDTIKTNVEAACNGTVSCADILALAARDGVVLVGGPSWAVALGRRDARTASESAANNEIPSPFLDLPTLVSMFAAKGLSARDLTVLSG
GHTIGQAQCQFFRSRIYNETNIDPNFAASRRAICPASAGDTNLSPLESLTPNRFDNSYYSELAAKRGLLNSDQVLFNDPLVTTYSTNNAAFFTDFADAMVKMSNISPLTGTSGEIRRNCR
VLN

Retrieve as FASTA

Remarks

Complete sequence from genomic and 1 EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCCCCTTGTTACGTACCCTCTTCTTTGTTGCACTCTCCATTCTTTCTCTCCTTGCTTGTTTTACCAATGCACAACTTTCTACCAACTTTTATGATAAAACTTGTCCTAACCTTCAA
ACCATTGTGAAAAATGCAATGCAGCAAGCTATCAATGGAGAAGCCAGGCTTGGAGCCTCTATACTTCGATTGTTCTTCCACGACTGTTTCGTGAACACGTAAGACTGCAGTTCCTTAAGC
CACTTCTATTTCTAAATCTGTATGTTTATAATTACATGTAAGGAGTGTATCATGTGAGAGAGTGAACAAATTAAGCTAACTTTTCACTACTCAAAGTTATAAGAGAATAATTAAGATTAA
ATTTAAACCAAATTAATAGTATAGTTATTCAGTATGTTTTATGTATTTATGGTTAAGATTAGTTCTTCTAACACTCACTTGATACATTTATAAAAAAGAATCACTCACTTGATATACGTA
CATTGTATATGCCTATATGGCTGCTTAAAGCAAAAAATTACACGTTTTAGCTAGGTTTAAGTTTATGGCTTTTGAAGGAGCCAAAAAATACTATAGTACTGTAACTACTTGAATAAGCCA
TCGAATGAAAATATTTGTCTTTTATTTATTTTTTTTCTCTAAGAAAAAGCACATGGATATTATCATATTTTCTAACACTAACTATTTAATACAGTATTTTTGTTTTGCATACACATTTTT
TCTCAGATCTAGAGGAAATATACACGCATGATGAATCATTTGTATAAGATTTTTTTTTATTCTGATTTTTTTAAGAATAGGACGCCTCCCGATGTAAGAATTAAATTGATGCAAATCTTA
CCAAAGGAATTGAAAGAAAGTAAAATAAATGGTATGAAAGTATCATTTATTTTCTAAAAATAAATTTCATTGGCAAGAATTAATTTAGTTATATAGCTCTTGACTTATGGAGATAGATAA
CATTAACATCTTGATTTTATTTCTTTGTAATTAAATTATCAGGGCTGCGATGCATCAATCTTATTGGATGACACTGCCACGTTTGTGGGTGAGAAAAATGCATTACCTAACCGAAATTCA
GTGAGGGGTTACGAAGTGATTGACACCATTAAAACCAACGTTGAAGCTGCTTGCAATGGCACGGTCTCTTGTGCAGATATTCTAGCACTTGCAGCAAGAGATGGAGTAGTTCTGTGGTGA
GCCATCCTTTTCCCCTTTCTTTGTGTGTATATGATTTCATTTTTATTTGGCAGCCTCTAGCTTCTACCAAATCTATTACTACTATGTTATATATATATATATGAATTCATTTTTATTTGA
CCCATTACATATACGTAGTATAATTCTTTTCACCTATATATGTACGTATATGGGATCTGAAAAATGGGTCAAATTTCCTTGACTTGGAAAGTTGATTTCAGGTCATAAAAGGAAATATGC
AAAAAATTCCAAGTTTTTAATTTCACTTTAATATCTGTACATAATTTTTCGAATAAACATCTTATTTTATTAAATGTATGTTGTTAAAAATAAAAAGAAAGAAAATACAAGGGAAATAAC
TTGAAACCTGTCAAATGACTGTCCTTAATTAAGATTATTTTTCTCTATTCTCTACCTGAAATCTCCAACATTACATTCAATGTACCCCAATTACATGAGTAAATATAGGTAATTAAATAA
TTGTATAAAAAAATATGTGAAAAATGTAAACTCTTTTAGGTTTTTTCCTGCTCCCGTTGAGAATTGCATTGAAATCATACAGCGAGATTCCAACCTACAGTCATTCTCTCAAGCATATAG
CTAAGCTAACTTGATGTCTGTTTTTTTCCTAACATATTTTGGCATGGGCTTATTTTCAAACCTTGTTCTCCACTTTCGGTTTTTACTTTTCCCTCTCACACGTAATGGATCACCATGTCA
ACTCTCGTAATTTAGTGGGGTCCCCCTCCTCTTAATAAGCATGCCTTGCACAAAAAATTACATCACACAAAGCAATAATCAAGAAAAGAAAAATAAAATAAAAACTATGGTGTCAGCCTT
GTCTCATTCTCGAGAAAAACCACTCATCTTCCCCTTTTAAAAATCTCGAAAACAAAAGTACCATCAAACCTTTGTCTCGTGGTGAGTTTTCCATATTTAGCTTTCGCTCACCACTCCCTA
ACTCAATAATTCACCATCATTTAAGTATCTGTTTGGTTTGATATTGAATAATCTAAAATCACCTTAAAATAGAAGTTGTAGTATTCATACAATCATAAATAGAATATTTTATATGATAAA
AAAATTGTTTATTTTCCTTTACTGTATTATTTATTAATTTTGTAGTTCTCTTTTCTCTCTCTTTATTGCCTAACTTGTTGTATTTTGATTTATAACTACCATTAATTTGATTTGTTATGT
AATCTGTTATATGAGTTGATGTACGAATAAAATTTCTCTTAAAATACCAAAGAACATAATTTTAAGTAAATATTCATATATTTAACGAGTGTTTGGTAACATGTTGGAAATCCACATTGT
GAAATCAATATATAAAAGCAGAAATTTTTTAATCCAGAAAACCAGGTTGAGGGCAAATGAACATGATACCAAACACACTTCATAAAAATATTAAAATTTCAACATGGTACCAAACAGATT
TCAGAAATAAATACTTAAGTGTGTTAATTGAAACATTGAATAATTTGATTGACAGGTTGGAGGACCTTCATGGGCAGTAGCACTAGGCAGAAGGGATGCAAGAACAGCAAGCGAGAGTGC
AGCCAACAACGAAATCCCTTCACCATTCTTGGACCTTCCCACACTCGTGTCCATGTTCGCCGCCAAAGGGTTAAGCGCACGTGACCTCACGGTGCTCTCCGGTGGCCACACCATAGGCCA
AGCACAGTGCCAATTTTTCAGAAGTCGCATATACAACGAGACCAACATTGACCCCAACTTTGCCGCATCAAGAAGAGCCATTTGCCCTGCCTCTGCTGGGGACACCAACTTGTCCCCTCT
TGAGTCTCTCACTCCCAATCGCTTTGACAACAGCTACTACTCTGAGCTTGCGGCTAAGCGTGGCCTTCTCAACTCGGACCAAGTGCTTTTCAATGACCCTTTGGTCACAACATATAGTAC
CAATAATGCTGCATTTTTCACTGACTTTGCTGATGCTATGGTTAAGATGAGCAATATTAGTCCTCTCACTGGGACTAGTGGTGAGATTCGAAGGAATTGCAGAGTTCTGAAT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA