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Entry information : PtaPrx55(PTA00036523)
Entry ID 5795
Creation 2007-09-14 (Christophe Dunand)
Last sequence changes 2007-09-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-26 (Christophe Dunand)
Peroxidase information: PtaPrx55(PTA00036523)
Name PtaPrx55(PTA00036523)
Class Class III peroxidase     [Orthogroup: Prx240]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx55
start..stop		 S start..stop
PtaPrx60 596 0 1..321 27..347
PabPrx165 580 0 1..320 27..345
PabPrx230 556 0 1..320 1..321
GbPrx54 449 3.4e-160 8..320 27..337
Literature and cross-references PtaPrx55(PTA00036523)
Literature Pratt,L., Cordonnier-Pratt,M.M., Lorenz,W.W., Zimmermann,C. and Dean,J.F.D. An EST database from calcium-deficient loblolly pine (Pinus taeda) roots.
EST ref. GenBank:   DR053196 [5' end]  CX650746 [Fragment]
Protein sequence: PtaPrx55(PTA00036523)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (306)
PWM (Da):   %s   34892.48 (32809.4)  
PI (pH):   %s   8.16 (7.44) Peptide Signal:   %s   cut: 32 range:32-337
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAGSAACSIS AVSDVGLRPD FYAHSCPNAF SIVKSVVEKA VEREARMAAS LLRLHFHDCF VQGCDGSVLL DDTPRFKGEK TAVPNNNSIR GFDVVDEIKS QLESACPGVV SCADILAIAA  RDSVVLSGGL KWDVMVGRRD SRSASFSGAN HDIPAPNSTL QTLLTKFKRH GLNVVDLVAL SGGHTIGQSR CVSFRQRLYM TTHTNLEKAY SNELKSRCPK SGGDNILSPL DVVSPTKFDR 
QYFTDLKSSR GLLISDQELY GNQSGDAHQI SSTSTALVSA FAEDEEKFFQ QFAESMVRMG NINPLIGRRG EIRKNCRRMN * 

Retrieve as FASTA  
Remarks Complete sequence genomic and from 2 ESTs (3' end is missing).

PTA00076626, PTA00031623
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGGCA GTGCTGCCTG TAGCATCAGT GCAGTTAGTG ATGTTGGTTT AAGGCCAGAT TTCTATGCCC ATTCCTGCCC GAATGCTTTT TCCATTGTCA AGTCCGTGGT AGAGAAGGCT  GTTGAAAGAG AGGCTCGGAT GGCAGCTTCT TTACTCCGTC TCCATTTCCA TGACTGTTTC GTTCAGGTAA TATCTATATC TATTATCTAT ATATGAGTAA AATATATTTA ATTACCAGTA  AATATCAAAG TTAGATTCCA GGAATATCCG TTTCGTTCAT CAGATTGAGA ATAAACTAAT GTTAATCCGA ATATGTATAC TGATTACAAA CTAATGTTAA TCGCAATATG TATACTGATT  ACTGCAGGGC TGCGACGGGT CGGTGCTGCT GGATGATACC CCTAGATTCA AAGGAGAGAA GACAGCAGTC CCCAATAACA ATTCAATCAG AGGATTTGAT GTGGTCGATG AAATCAAAAG  CCAACTAGAG AGTGCATGCC CAGGGGTGGT GTCTTGCGCT GACATTCTTG CCATTGCAGC CAGAGATTCA GTGGTTTTGG TAATTATTAT ATTGATATTA TTGAGTGGTT TTGGTAATTA  TTATATTGAT ATAAAACATT TTTATGTCGA TTGCAGATTT CTGAAATATC TCAGTCTTCT CGTCAATGTA TCTGTACATA TATATATAAT TGATTATATT GTTGGCATTG GCAGAGCGGA  GGGCTGAAAT GGGATGTCAT GGTGGGAAGA AGGGACTCAA GAAGCGCGAG TTTCAGCGGG GCAAACCACG ATATCCCCGC ACCCAACTCC ACTCTCCAAA CACTCCTCAC AAAGTTCAAA  CGGCATGGTC TCAACGTCGT AGACTTGGTC GCACTTTCAG GTAATATTAT TGCTATTATC AACTCATAAA GTTAATTGTT AATTGTTTCC CATTGTTGAT TTATAATTTT GCAATGCAGG  AGGCCACACC ATCGGTCAGT CTCGGTGTGT AAGCTTCAGA CAGAGGCTCT ACATGACTAC TCATACGAAT TTGGAGAAGG CTTATTCCAA TGAATTGAAA TCCAGATGCC CCAAATCCGG  GGGAGACAAC ATATTGTCCC CATTAGACGT TGTTAGCCCC ACTAAATTTG ACCGCCAATA TTTTACCGAC TTGAAGAGCT CTCGGGGACT TTTGATCTCA GACCAGGAGC TCTATGGCAA  CCAAAGTGGT GATGCTCATC AAATATCCTC CACCAGCACG GCCTTAGTTT CTGCATTTGC GGAGGACGAG GAGAAATTTT TCCAACAGTT CGCGGAGTCG ATGGTGAGAA TGGGAAACAT 
TAACCCTCTC ATCGGAAGGA GGGGAGAAAT TCGAAAGAAT TGTCGTCGAA TGAACTGA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGGCA GTGCTGCCTG TAGCATCAGT GCAGTTAGTG ATGTTGGTTT AAGGCCAGAT TTCTATGCCC ATTCCTGCCC GAATGCTTTT TCCATTGTCA AGTCCGTGGT AGAGAAGGCT  GTTGAAAGAG AGGCTCGGAT GGCAGCTTCT TTACTCCGTC TCCATTTCCA TGACTGTTTC GTTCAGGGCT GCGACGGGTC GGTGCTGCTG GATGATACCC CTAGATTCAA AGGAGAGAAG  ACAGCAGTCC CCAATAACAA TTCAATCAGA GGATTTGATG TGGTCGATGA AATCAAAAGC CAACTAGAGA GTGCATGCCC AGGGGTGGTG TCTTGCGCTG ACATTCTTGC CATTGCAGCC  AGAGATTCAG TGGTTTTGAG CGGAGGGCTG AAATGGGATG TCATGGTGGG AAGAAGGGAC TCAAGAAGCG CGAGTTTCAG CGGGGCAAAC CACGATATCC CCGCACCCAA CTCCACTCTC  CAAACACTCC TCACAAAGTT CAAACGGCAT GGTCTCAACG TCGTAGACTT GGTCGCACTT TCAGGAGGCC ACACCATCGG TCAGTCTCGG TGTGTAAGCT TCAGACAGAG GCTCTACATG  ACTACTCATA CGAATTTGGA GAAGGCTTAT TCCAATGAAT TGAAATCCAG ATGCCCCAAA TCCGGGGGAG ACAACATATT GTCCCCATTA GACGTTGTTA GCCCCACTAA ATTTGACCGC  CAATATTTTA CCGACTTGAA GAGCTCTCGG GGACTTTTGA TCTCAGACCA GGAGCTCTAT GGCAACCAAA GTGGTGATGC TCATCAAATA TCCTCCACCA GCACGGCCTT AGTTTCTGCA  TTTGCGGAGG ACGAGGAGAA ATTTTTCCAA CAGTTCGCGG AGTCGATGGT GAGAATGGGA AACATTAACC CTCTCATCGG AAGGAGGGGA GAAATTCGAA AGAATTGTCG TCGAATGAAC 
TGA 

Retrieve as FASTA