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Entry information : EcabTPO
Entry ID 5823
Creation 2007-10-03 (Christophe Dunand)
Last sequence changes 2007-10-03 (Christophe Dunand)
Sequence status partial
Reviewer Marcel Zamocky
Last annotation changes 2007-10-03 (Christophe Dunand)
Peroxidase information: EcabTPO
Name EcabTPO
Class Thyroid peroxidase     [Orthogroup: TPO001]*
Taxonomy Eukaryota Metazoa Chordata Mammalia Equidae Equus
Organism Equus caballus    [TaxId: 9796 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcabTPO
start..stop		 S start..stop
AImeTPO 1285 0 1..796 1..841
HsTPO01 1274 0 1..796 1..839
MmulTPO01 1269 0 1..796 1..839
GgoTPO 1259 0 1..796 1..837
Literature and cross-references EcabTPO
Literature Lindblad-Toh,K., Wade,C.M., Di Palma,F., Gnerre,S. and Lander,E.S. The Genome Sequencing Platform, The Genome Assembly Team The Genome Sequence of Equus caballus (horse), Assembly Version 2.0. Unpublished.
DNA ref. GenBank:   AAWR02004599 (267..27850) [5' end]  AAWR02004598 (29307..47995) [3' end]
Protein sequence: EcabTPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   796 (295)
PWM (Da):   %s   86761.26 (31640.0) Transmb domain:   %s   i5-24o
PI (pH):   %s   6.67 (6.88) Peptide Signal:   %s   cut: 25 range:25-319
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRALVVLGAT LAVACAGVLF PFILRGKDLL WGKxxxxxxR RNLNKREIIS PSQLLSFSKL PEPTSRAVSR AAEIMETSVQ VMRRRGYLNL KQAQPPTDAL SEDLLNVIAN MSGCLPHMLP  PKCPRTCLAD RYRLITGACN NRDHPRWGAS NTALARWLPP AYEDGISEPR GWNPHFLYNG FPLPSVREVT RQVIQVSNEA VTEDDQYSDL LTAWGQYIDH DIAFTPQSTS RAAFRGGADC  QLTCETRSPC FPIQLPAADA SLTAGPACLP FYRSSAACGT GTQGALFGNV SSAHPRQQMN GLTSFLDAST VYGSSPASEK LLRNWTSAEG LLRVNTRHQD AGRAYLPFVP PPTPSACAPE  PGADPAARAP CFLAGDGRAS EIPSLAAVHT LWLREHNRxx xxQIITMRDY VPRILGPEAF GRLVGPYEGY DPAVDPTVSN VFSTAAFRFG HATVHPLVRR LDARFQEHPA LPRLPLHDAF  FRPWRLLWEG GLDPVVRGLL ARPAKLQVQD QLMNQELTER LFVLANSGTL DLASLNLQRG RDHGLPGYNE WREFCGLPRL ETRADLNTAI ANRSIADRIM DLYKHPDNID VWLGGLAENF  LPKARTGPLF ACIIGKQMKA LRDGDxFWWE NSHVFTEAQR RELARHSLSR VICDNTGLTR VPAEAFRVGT FPQDFESCED IPGMDLAVWR EALPQDGTCG SPEGVENGDF VLCEESGKRV 
LVFSCRHGFE LQGQEQITCT PQGWDFQPPV CKDINECEDM MDPPCHLSAR CKNTKGSFQC ECTDPYVLGE DGRTCV 

Retrieve as FASTA  
Remarks Partial sequence from genomic. short sequences are missing in the 5' and 3' end is missing.