View Redoxidase 5984

Entry information : Gint2CysPrx02_50803

Entry ID	5984
Creation	2007-11-22 (Christophe Dunand)
Last sequence changes	2012-05-30 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-30 (Christophe Dunand)

Peroxidase information: Gint2CysPrx02_50803

Name

Gint2CysPrx02_50803

Class

Typical 2-Cysteine peroxiredoxin [Orthogroup: 2CysPrx001]

Taxonomy

Eukaryota Hexamitidae Giardia

Organism

Giardia intestinalis (G. lamblia) [TaxId: 5741 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	Gint2CysPrx02_50803 start..stop	S start..stop
Gint2CysPrx02_P15	505	0	1..246	1..246
Gint2CysPrx01_50803	371	9.56e-133	48..246	3..201
Gint2CysPrx01_P15	371	1.3e-132	48..246	3..201
Gint2CysPrx03_P15	369	6.23e-132	48..244	3..199

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5984' 'join(74856..75596)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	74856..75596	739
join(74856..75596)

Literature and cross-references Gint2CysPrx02_50803

Literature	Morrison,H.G., McArthur,A.G., Gillin,F.D., Aley,S.B., Adam,R.D., Olsen,G.J., Best,A.A., Cande,W.Z., Chen,F., Cipriano,M.J., Davids,B.J., Dawson,S.C., Elmendorf,H.G., Hehl,A.B., Holder,M.E., Huse,S.M., Kim,U.U., Lasek-Nesselquist,E., Manning,G., Nigam,A., Nixon,J.E., Palm,D., Passamaneck,N.E., Prabhu,A., Reich,C.I., Reiner,D.S., Samuelson,J., Svard,S.G. and Sogin,M.L. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Science 317 (5846), 1921-1926 (2007).
DNA ref.	GenBank: AACB02000046.1 (74856..75596)
mRNA ref.	GenBank: XM_001704780.1

Protein sequence: Gint2CysPrx02_50803

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	246 (231)
PWM (Da):	27510.79 (25980.9)
PI (pH):	6.64 (6.65)	Peptide Signal:	cut: 16 range:16-246

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MLLLICLISV AFAAACTLTV NKNTCIPDKC EKFGDTEVCM QLKTTSSVPI PGTPCPDFEV EVLTPELKFT KRKLADYKGK YLIIFFYPAD FTFVCPSEII HFSSMAEQLK KKYNTEIIIG STDTVYSHHA WCLQNKTDGG IGPCKCDLFA DTNHKMARDF GILVEEMGLA LRAMFIVSDK GIVRHVTIND FPVGRSVEEA MRMIQAFQYA DKTGGVIPCG WTPEKNDFII PDPEKKKEYF
SKTFTK

Retrieve as FASTA

Remarks

Complete sequence from DNA (no intron) and mRNA. Strain="WB C6 / ATCC 50803"

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGCTACTGC TGATATGTCT TATCTCGGTT GCCTTTGCGG CTGCTTGTAC GCTGACCGTG AATAAGAATA CGTGCATACC TGATAAGTGT GAGAAGTTTG GCGACACAGA AGTCTGCATG CAGCTCAAGA CAACCAGTTC CGTTCCCATT CCAGGCACCC CTTGTCCCGA CTTTGAAGTG GAGGTCCTTA CCCCTGAACT CAAGTTTACT AAGCGTAAGC TTGCAGATTA CAAGGGCAAA TATCTGATCA TCTTCTTCTA TCCAGCCGAC TTCACCTTTG TCTGTCCCTC TGAGATCATT CATTTTTCCT CTATGGCTGA GCAACTGAAG AAGAAGTATA ACACTGAGAT TATCATTGGC TCGACAGACA CTGTTTATAG CCACCACGCT TGGTGCCTTC AGAATAAGAC AGACGGGGGG ATCGGGCCCT GCAAATGTGA TCTATTCGCC GACACGAATC ATAAGATGGC ACGTGATTTT GGCATACTCG TTGAGGAAAT GGGTCTTGCT CTGCGTGCCA TGTTTATCGT CTCCGATAAA GGAATTGTAC GCCATGTTAC AATTAACGAT TTTCCTGTGG GTCGCTCTGT CGAAGAAGCT ATGCGTATGA TTCAGGCCTT CCAGTACGCT GATAAAACCG GCGGTGTCAT CCCGTGCGGC TGGACTCCTG AGAAGAACGA CTTCATTATT CCTGATCCCG AAAAGAAGAA GGAATACTTT
TCTAAGACCT TCACAAAGTG A

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA