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Entry information : LePrx07 (Solyc04g080760.2.1[2.3])
Entry ID 600
Creation 2008-01-14 (Christophe Dunand)
Last sequence changes 2011-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-22 (Messaoudi)
Peroxidase information: LePrx07 (Solyc04g080760.2.1[2.3])
Name (synonym) LePrx07 (Solyc04g080760.2.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx039]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Flowers
Radicles
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx07
start..stop		 S start..stop
NtPrx05-1A 568 0 1..331 1..329
LePrx73 556 0 2..331 3..331
NtPrx75-1A 548 0 1..331 1..337
NtPrx75-1B 546 0 1..331 1..337
Literature and cross-references LePrx07 (Solyc04g080760.2.1[2.3])
Literature van der Hoeven,R., et al, Generation of ESTs from tomato root, during and after fruit set, Generation of ESTs from tomato radicle tissue
DNA ref. GenBank:   AEKE02013245.1 (21970..19999)
mRNA ref. GenBank:   BT012970
Cluster/Prediction ref. UniGene:   Les.4952
Protein sequence: LePrx07 (Solyc04g080760.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (311)
PWM (Da):   %s   36392.62 (34244.6) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.31 (8.38) Peptide Signal:   %s   cut: 21 range:21-331
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASLGLVMFI LSCAFFQAFA VSSSNDYGGL FPELYQFSCP QANEIVMSVL EEAIAKDPRM AASLLRLHFH DCFVQGCDAS ILLDKNSAFK SEKEAGPNKN SLRGYEVIDE IKAKLEQVCP  HTVSCADILA LAARDSVVLS GGPYWEVPLG RRDSKTASFN KANVNIPAPN STIQNLINLF NKQGLNVQDL VALSGGHTIG MARCVSFKQR LYNQKGDNLP DVTLEKTYYN GLKSICPTSG 
GDNNISPLDV ASPIRFDNTY FKLLLWGKGL LNSDEVLLTG NVKKTKELVK SYAENEAIFF RHFAKTMVKM GNINPLTELK GEIRKNCRRI N 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs and genomic (3 introns). Stop codon and frame shift in the sequence (TIGR compile). Also detected in BABP01063847.1.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCTC TTGGTCTAGT AATGTTTATT TTATCTTGTG CATTTTTCCA AGCCTTTGCA GTTTCTAGTT CCAATGATTA TGGTGGTCTA TTCCCAGAGT TGTACCAATT CTCATGTCCT  CAAGCAAATG AAATTGTAAT GTCTGTTTTA GAAGAGGCAA TTGCTAAAGA TCCAAGAATG GCTGCTTCTT TGCTTAGACT TCATTTCCAT GATTGCTTCG TTCAGGTATA AACTTTTATA  CACATTTTCC TATACTATAT ATTATAGTTT GGGGTCATTT ATATCATGTC TTTGGTAATT CGTTTCATAT TTATCTCCCT AATACGTCCC GTCCTCAACT AAAGATCTAT TAAAGTCAAG  GACAAATACG AGACGATTAG GGTATGAATG ACTCCAAAAT ATAATGAACG ATAAGTATTG AAATGTTAAA GATGCTAAAT TTGGACCTTT CTCCTCGATA ATTTAATTTA TTTTCTTTTT  ACTTGTATTG TAGGGTTGTG ATGCATCGAT ACTATTGGAT AAAAATAGTG CATTCAAAAG TGAAAAGGAA GCAGGACCAA ACAAGAATTC TCTAAGGGGA TATGAAGTAA TTGATGAAAT  CAAAGCTAAA CTAGAGCAAG TTTGTCCTCA CACCGTCTCT TGTGCTGATA TTTTAGCTCT TGCTGCTCGT GATTCTGTTG TCCTAGTAAG CATACATCTA AACTCCAACA TTTCTTTCTC  ATTTCATCAT GAAAAGGATC GCAAATTACG TTGCTCGGAT TCTTCAAAAA TAATTATATA TATGTGTTTA AAGTTAAATG CATTTTTAGA GGATCTTATA TATAACCCCC TATACAACAA  CATTTTTCAA TTAAATGCAT TTCTAGAGGA TCTTATATAT AACCCCCTAT ACAACAACAT TTTTCAAAAA TCCGAATAAC ATATGCGTGT CGGATCTTAT TAAGCTAGTA CATTTTCGAA  TGATTTTACA TGGATATCGC AACATTTTTG AAAAGTCGGA CACCATATGT ATATGGATCC TCCATAGTGT TTTTTTAGAA TCTTATATAT CTGTGATAAT ACTGACAATA TTTGTGTACA  TGTCGAATCT TTCAAATTTA GTACATTTTT TTTCATAGAT TGCAATTATT TTGTCTTTAA ACAAAACTTT TTCAAAGATT TATCACGTTA CTCTCATATA TCGTAACTGA ACTTTATCTA  AAAAAAATTC GCTTAATTAT ATAGTAGAAT ATAATAATTT AGTAGTAGTC ACTTCAAGAT TTTTGCTTAT AATAATGTGT GTTGTAATAG AGTGGTGGAC CATATTGGGA AGTACCACTA  GGAAGAAGAG ACTCAAAGAC AGCAAGTTTC AACAAAGCAA ATGTAAACAT TCCAGCACCA AACTCAACAA TCCAAAATCT TATAAACCTC TTCAATAAAC AAGGTCTTAA TGTACAAGAC  CTTGTTGCAC TTTCTGGTAA GTTACATCAA TTTTATACAA ATTGTATTCG ATACATGAGA ATCATTTTTT TTTTTCGAAA ACATTTATAT CTGTTTATTT TTTTTTAATG CCTCAACAGG  AGGGCACACT ATAGGTATGG CAAGATGTGT GTCATTTAAA CAAAGACTAT ACAATCAAAA AGGTGACAAT TTACCAGATG TAACTCTAGA GAAAACTTAT TACAATGGAT TAAAATCAAT  TTGTCCAACA AGTGGTGGAG ACAATAATAT TTCTCCTCTA GATGTTGCAT CACCAATCAG ATTTGATAAC ACATATTTCA AATTATTGCT ATGGGGCAAA GGTCTTTTGA ACTCAGATGA  AGTGCTTCTA ACTGGAAATG TGAAAAAGAC CAAGGAATTG GTGAAGAGTT ATGCTGAAAA TGAGGCGATT TTTTTTCGTC ATTTTGCTAA GTCTATGGTG AAAATGGGAA ATATTAATCC 
TCTGACTGAG TTGAAGGGTG AAATTAGAAA GAACTGCCGC AGAATCAACT GA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCTC TTGGTCTAGT AATGTTTATT TTATCTTGTG CATTTTTCCA AGCCTTTGCA GTTTCTAGTT CCAATGATTA TGGTGGTCTA TTCCCAGAGT TGTACCAATT CTCATGTCCT  CAAGCAAATG AAATTGTAAT GTCTGTTTTA GAAGAGGCAA TTGCTAAAGA TCCAAGAATG GCTGCTTCTT TGCTTAGACT TCATTTCCAT GATTGCTTCG TTCAGGGTTG TGATGCATCG  ATACTATTGG ATAAAAATAG TGCATTCAAA AGTGAAAAGG AAGCAGGACC AAACAAGAAT TCTCTAAGGG GATATGAAGT AATTGATGAA ATCAAAGCTA AACTAGAGCA AGTTTGTCCT  CACACCGTCT CTTGTGCTGA TATTTTAGCT CTTGCTGCTC GTGATTCTGT TGTCCTAAGT GGTGGACCAT ATTGGGAAGT ACCACTAGGA AGAAGAGACT CAAAGACAGC AAGTTTCAAC  AAAGCAAATG TAAACATTCC AGCACCAAAC TCAACAATCC AAAATCTTAT AAACCTCTTC AATAAACAAG GTCTTAATGT ACAAGACCTT GTTGCACTTT CTGGAGGGCA CACTATAGGT  ATGGCAAGAT GTGTGTCATT TAAACAAAGA CTATACAATC AAAAAGGTGA CAATTTACCA GATGTAACTC TAGAGAAAAC TTATTACAAT GGATTAAAAT CAATTTGTCC AACAAGTGGT  GGAGACAATA ATATTTCTCC TCTAGATGTT GCATCACCAA TCAGATTTGA TAACACATAT TTCAAATTAT TGCTATGGGG CAAAGGTCTT TTGAACTCAG ATGAAGTGCT TCTAACTGGA  AATGTGAAAA AGACCAAGGA ATTGGTGAAG AGTTATGCTG AAAATGAGGC GATTTTTTTT CGTCATTTTG CTAAGTCTAT GGTGAAAATG GGAAATATTA ATCCTCTGAC TGAGTTGAAG 
GGTGAAATTA GAAAGAACTG CCGCAGAATC AACTGA 

Retrieve as FASTA