Entry information : PtRboh06 (POPTR_0012s11340 / Potri.012G111600)
| Entry ID | 6071 |
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| Creation | 2008-01-25 (Christophe Dunand) |
| Last sequence changes | 2010-07-15 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Qiang Li |
| Last annotation changes | 2012-03-08 (Qiang Li) |
Peroxidase information: PtRboh06 (POPTR_0012s11340 / Potri.012G111600)
| Name (synonym) | PtRboh06 (POPTR_0012s11340 / Potri.012G111600) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| Class | Respiratory burst oxidase homolog [Orthogroup: Rboh001] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Salicaceae Populus | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue type | N/D |
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| Inducer | N/D |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6071' 'complement(join(13322589..13322698,13323099..13323655,13324683..13324753,13324964..13325066,13325171..13325286,13325374..13325469,13325551..13325934,13326010..13326432,13326541..13326654,13326779..13326827,13326924..13327083,13327198..13327744))' |
Exons►
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Literature and cross-references PtRboh06 (POPTR_0012s11340 / Potri.012G111600)
| Literature | REFERENCE 1 JGI, The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313 (5793), 1596-1604 (2006).
REFERENCE 2 Ralph,S., et al., Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences. Mol. Ecol. 15 (5), 1275-1297 (2006). |
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| DNA ref. | Phytozome 12: Chr12 (13327744..13322589) |
| Cluster/Prediction ref. | UniGene: Pth.15866 Pth.13516 [3' end] |
| Omic ref. | ePlant: Potri.012G111600 |
Protein sequence: PtRboh06 (POPTR_0012s11340 / Potri.012G111600)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (Chromo 2, 11 introns) and 3 ESTs. | ||||||||||||
| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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