Entry information : SmPrx09-1_40 (SmPrx09a_40)
Entry ID | 6196 |
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Creation | 2008-06-26 (Christophe Dunand) |
Last sequence changes | 2008-06-26 (Christophe Dunand) |
Sequence status | complete |
Reviewer | Paula Nunes |
Last annotation changes | 2011-01-25 (Toky Ramarohetra (Scipio)) |
Peroxidase information: SmPrx09-1_40 (SmPrx09a_40)
Name (synonym) | SmPrx09-1_40 (SmPrx09a_40) | ||||||||||||||||||||||||||||||||||||
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Class | Class III peroxidase [Orthogroup: Prx053] | ||||||||||||||||||||||||||||||||||||
Taxonomy | Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella | ||||||||||||||||||||||||||||||||||||
Organism | Selaginella moellendorffii [TaxId: 88036 ] | ||||||||||||||||||||||||||||||||||||
Cellular localisation | N/D |
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Tissue types | strobili (cone) Whole plant |
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Inducers | Carbon starvation Cold stress |
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Repressor | N/D |
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Best BLASTp hits |
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Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6196' 'complement(join(404814..405295,405348..405513,405570..405764,405828..406052))' |
Exons►
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Literature and cross-references SmPrx09-1_40 (SmPrx09a_40)
Literature | Richardson,P., Lucas,S., Rokhsar,D., Wang,M. and Lindquist,E.A. DOE Joint Genome Institute Selaginella moellendorffii EST project. Unpublished (2008)
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DNA ref. | Phytozome 12: scaffold_40 (406052..404814) |
mRNA ref. | JGI transcript: 233271 |
EST ref. | GenBank: FE427388.1 [5' end] FE460737.1 [3' end] |
Protein sequence: SmPrx09-1_40 (SmPrx09a_40)
Sequence Properties first value : protein second value (mature protein) |
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Sequence Send to BLAST Send to Peroxiscan |
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Remarks | Complete sequence from genomic (3 introns) and 5 ESTs. Contigs also contains SmPrx08. Strain="Plant Delights". |
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DNA ► Send to BLAST |
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CDS► Send to BLAST |
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