1. Browse the Database
  2. View Redoxidase
Entry information : PtaDiOx02
Entry ID 6221
Creation 2008-07-07 (Christophe Dunand)
Last sequence changes 2008-07-07 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2008-07-07 (Christophe Dunand)
Peroxidase information: PtaDiOx02
Name PtaDiOx02
Class Alpha-dioxygenase     [Orthogroup: DiOx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Cold stress
Repressor N/D
Best BLASTp hits
Perox score E-value PtaDiOx02
start..stop		 S start..stop
PabDiOx01 315 2.61e-102 3..209 16..224
PabDiOx01 280 8e-89 214..379 472..637
PtaDiOx01 294 3.24e-94 3..209 16..224
PtaDiOx01 275 6.19e-87 214..379 455..621
PabDiOx213 295 4.46e-94 3..209 65..274
PabDiOx213 283 1.49e-89 214..379 522..687
PabDiOx141 277 1.07e-91 214..379 132..298
Literature and cross-references PtaDiOx02
Literature Pratt,L., Cordonnier-Pratt,M.-M., Lorenz,W.W., Zimmermann,C. and
Dean,J.F.D. An EST database from cold-treated loblolly pine (Pinus taeda) roots. Unpublished (2005)
EST ref. GenBank:   CX651450.1 [5' end]  CX651381.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.19727
Protein sequence: PtaDiOx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   400
PWM (Da):   %s   45613.26  
PI (pH):   %s   8.06
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGLLDRNLVS QYSRLSFIDR LLFLIIHLVD RFYAWHRLPV SLGLLYLEIR RSLHERYNLI NVGSTAVQRG RYNAVDRTPD GSYDDAFYGE TGCQGAFFGR NMLPSPQHDK LLKPHPMVVA  TKLLSRRKMV DTGKQFNMLA ATWIQFMIHD WVDHVEDTVY VELSAPPKVA QQCPLTAFKF FEGKAVPTGS CDIKTGSRNR RTAWWDGSVx xxxERPYPVD MPALEIYRDR ERSIARYNEF  RRNMLMIPIS KWEDLTDDKE AIQMLTEVYD NDVELLDLQV GLMAEKKIKG FAISETAFFI FLLMASRRLE ADSCFTSDFK KEVYTEVGMA WINNTEGLKD VLKRHHPELV EKWMNSSSAF 
SVWNASPEPK NNTPLYLRLS LGVTMCLCVI LLRRLLCVSA 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs. No overlap between 5' and 3'end.