View Redoxidase 6307

Entry information : PpaPrx34 (PP00008G00930)

Entry ID	6307
Creation	2008-08-06 (Christophe Dunand)
Last sequence changes	2008-08-06 (Christophe Dunand)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2012-01-05 (Qiang LI)

Peroxidase information: PpaPrx34 (PP00008G00930)

Name (synonym)

PpaPrx34 (PP00008G00930)

Class

Class III peroxidase [Orthogroup: Prx037]

Taxonomy

Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella

Organism

Physcomitrella patens [TaxId: 3218 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PpaPrx34 start..stop	S start..stop
SmPrx52-1_16	336	2.67e-115	4..317	31..346
SmPrx52-2_1	335	3.21e-115	10..317	32..346
ApuncPrx14	327	1.9e-112	3..317	2..314
AagPrx12	326	4.36e-112	14..317	2..306

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6307' 'complement(join(1722076..1723038))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1722076..1723038	961
complement(join(1722076..1723038))

Literature and cross-references PpaPrx34 (PP00008G00930)

Literature	Rensing,S. et al., The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants. Science (2008)
DNA ref.	Phytozome 12: scaffold_8 (1723038..1722076)

Protein sequence: PpaPrx34 (PP00008G00930)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	320 (299)
PWM (Da):	34633.79 (32346.5)	Transmb domain:	i13-35o
PI (pH):	6.88 (7.70)	Peptide Signal:	cut: 22 range:22-320

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MEWGSVLILL LLSSVILFSE GHLSSDYYKS TCPNVERVVR SSLRRAFLLD PSAPASLLRL SFHDCQVEKC DASILLDSVS NDINGERESG GNFGIRRLDI IDRVKQDLEK ECPGVVSCAD IVAMAGRDAV SYTGGPEIPI PLGRKDATTA SSENADDQLP PASSTVSTML QVFSRYGMTA AETVGILGAH TLGIGHCVNV VDRLYPTRDP ALSTGLYLQL RVLCPTKEPL NLTILPNDLS
VYSFDNRYFK DVLGGRGLFR ADANLVGDAR TKPLVAKFAS DQSLFFKTFA SAYVKLVSAQ VLTGSRGEVR TNCRRVNAQD

Retrieve as FASTA

Remarks

Complete sequence from genomic (no introns). No EST.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGAGTGGG GATCCGTTTT GATATTATTG CTGCTGAGCA GTGTGATCCT CTTCAGTGAA GGGCACTTGA GCTCAGATTA TTATAAAAGC ACATGCCCTA ACGTCGAACG GGTTGTGCGC AGCAGCTTGA GAAGAGCGTT TCTGCTAGAT CCAAGTGCTC CAGCTTCTCT GCTTCGCCTC TCCTTCCACG ATTGCCAAGT TGAGAAATGT GATGCGTCCA TCTTGTTAGA CTCCGTCTCC AATGACATCA ACGGGGAAAG AGAGTCAGGC GGGAATTTTG GCATTCGACG ATTGGATATC ATCGACCGAG TGAAGCAAGA TCTCGAAAAG GAGTGCCCGG GGGTCGTATC CTGCGCTGAT ATCGTAGCCA TGGCTGGTCG AGACGCTGTC TCTTACACAG GTGGGCCTGA AATTCCCATT CCGTTGGGCC GCAAGGACGC AACAACTGCA AGCAGCGAAA ATGCTGACGA TCAGCTGCCA CCAGCTTCCT CCACCGTCTC CACGATGCTC CAGGTCTTCT CGCGTTATGG CATGACCGCG GCTGAGACCG TCGGTATTCT GGGAGCGCAT ACTCTGGGCA TAGGGCACTG CGTCAATGTG GTAGACAGAT TGTATCCCAC TCGAGACCCC GCTCTGTCCA CAGGACTTTA CCTGCAGCTA CGCGTTCTGT GCCCCACCAA GGAGCCCCTC AACCTCACCA TACTCCCTAA CGACCTCTCA GTCTACAGCT TCGACAACCG CTACTTCAAG GATGTGCTCG GCGGCCGAGG ACTCTTCCGA GCTGATGCGA ATCTGGTAGG TGACGCTCGT ACCAAGCCTT TGGTTGCGAA GTTTGCGTCC GACCAGAGCT TGTTCTTCAA GACCTTTGCC TCGGCGTATG TGAAGCTGGT GTCCGCCCAA GTGTTGACAG GAAGTCGGGG GGAGGTGCGC ACCAACTGCC GACGAGTAAA TGCACAGGAC
TAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA