Entry information : PpaPrx45
Entry ID 6318
Creation 2008-08-07 (Christophe Dunand)
Last sequence changes 2008-08-07 (Christophe Dunand)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-05 (Qiang LI)
Peroxidase information: PpaPrx45
Name PpaPrx45
Class Class III peroxidase    [Orthogroup: Prx030]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaPrx45
start..stop
S start..stop
PpaPrx44 399 1.24e-140 13..332 2..318
PtaPrx129 350 6.63e-121 1..330 7..333
GbPrx04 349 1.63e-120 25..328 28..329
SmPrx56-2_33 347 6.48e-120 1..328 15..336
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6318' 'join(581273..581482,581626..581817,582237..582402,582574..583004)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 581273..581482 208 N° 2 581626..581817 190 N° 3 582237..582402 164 N° 4 582574..583004 429
join(581273..581482,581626..581817,582237..582402,582574..583004)


exon

Literature and cross-references PpaPrx45
Literature Rensing,S. et al., The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants. Science (2008).
DNA ref. Phytozome 12:   scaffold_112 (581273..583004)
Protein sequence: PpaPrx45
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332
PWM (Da):   %s   35921.95 Transmb domain:   %s   i5-27o
PI (pH):   %s   6.7
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALTLVTCVGGKILSVAATWDDSHLTPSFYDNKCPHLQKVVSSKVEAGRRRDQRLPASVLRLHFHDCFVNGCDGSILLDDRPGFVGEKSAAPNLNSARGFELIDDIKQDVEALCPDTVSC
ADILTIAARDSVAL
SGGPYWEVQLGRRDSLTASKTDAENSIPQPTFTVTQLVASFNAVGLNEKDVVALSGSHSFGKARCTSFQNRLGNQASGSQSPGSDPFLESSYLAKLQTLCPSNGDG
NTTVNLDHFTPVHFDNQYYKNLQAAKGLLNSDAVLHTTNGQSNQLVEIYANDERVFFKDFAQSVLKMGSIKVMTGNKGEVRRNCRLPNTIRA

Retrieve as FASTA  
Remarks Complete sequence from genomic (3 introns). No EST. Ecotype="Gransden 2004". Tandem with PpaPrx46.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCTTACACTGGTGACATGTGTTGGTGGAAAAATTCTTTCGGTAGCTGCTACTTGGGATGACTCCCACCTCACCCCCTCCTTCTACGACAACAAATGCCCGCATCTGCAGAAAGTG
GTGTCTAGCAAGGTGGAGGCCGGAAGGCGGCGTGACCAGCGATTGCCAGCTTCCGTTCTGCGACTCCACTTCCATGATTGCTTTGTCAAC
ACGTAAACAGGCCCATTCTTGTCTATAATT
AATGATGTTACGCTAGGCATGTTTGTCATATTACACGCATTGCTGCATGGTTAATCAAGAGGTCAACGACTCATTGATTTAACGATGGCTACCTATTCGAACATTTTCTCGGCAGGGGTG
TGATGGATCCATCTTGCTCGACGACAGACCAGGCTTCGTAGGGGAGAAAAGTGCCGCCCCGAACTTGAACTCGGCGAGAGGGTTCGAATTGATCGACGATATCAAGCAAGATGTGGAGGC
TTTGTGTCCCGACACAGTCTCCTGTGCTGACATATTGACCATTGCAGCCCGGGACTCCGTTGCCTTG
TGGTGGGTAGCTAACTTCGCTGTCAGCTCATTTAGTTCTCAGACATTGTCACA
ACAGTTTTACAGTATGGATCAATGACTGGGGAACCTATCAGTGTTACCCAGCCTCGAACATGAAACTCGTTGGTGGGAGGATGAATTAATGGATAATGATGAAGAATTCAGACTCCAGTT
ACACAAGTCAATCTGTGCATGCTAGTAGTTGGCTGTTGAGTGGTTGAGAAAGATAGTGTCAAAGTCAACCATGACCTGGTTGACTTCGGGGTCAACTTAGCAAGCTGTCTCTGTATCCTA
TCTAGCCACGATACTCGCCGGATAATGAAGATTCACAACGAATTGGAAGCCTAATAATGGTACGCTCACAAGATCTGCAATATTAGTTGAAAATAGTTGATGTGTGTATTTGTGTGGGTG
TTGACCAGAGTGGTGGCCCGTATTGGGAAGTACAGCTTGGCCGGAGAGACAGTCTGACAGCCAGCAAGACCGATGCGGAAAATTCCATCCCCCAGCCGACCTTCACCGTTACTCAGCTTG
TTGCTAGTTTCAACGCTGTTGGGCTCAATGAAAAAGACGTCGTTGCACTCTCAG
AGGTACTCCGACTAACACTTGATTTCCAAATGAGTCGACACGATAGACAGAAGGGTGAGTTTTATC
AGGAAATGAAAAATCTGGTGATCATATCATTCAATTCAGGAACAAACAGTATTGGGTTCTAAAAAGTGAAGGCTTCTGCTGACTTCGACTTGGTATATATTTTCCAGGTTCGCATTCGTT
TGGCAAGGCAAGGTGTACTAGCTTCCAGAATCGTCTCGGAAACCAAGCTAGTGGTTCGCAGTCTCCAGGCTCAGATCCATTTCTGGAGAGCAGTTACCTTGCGAAGCTGCAGACTCTGTG
TCCGTCGAATGGAGACGGGAACACTACAGTCAATCTAGACCACTTCACTCCAGTCCATTTCGACAACCAGTATTACAAGAATCTGCAAGCTGCGAAGGGGCTGCTCAACTCAGACGCCGT
GTTGCATACCACCAACGGCCAGAGCAACCAGCTTGTGGAAATTTATGCAAATGATGAACGCGTTTTCTTCAAGGACTTTGCCCAATCTGTGCTCAAGATGGGGTCGATTAAGGTGATGAC
TGGAAACAAGGGCGAGGTGCGTCGCAACTGCCGGTTACCGAATACTATTCGCGCTTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCTTACACTGGTGACATGTGTTGGTGGAAAAATTCTTTCGGTAGCTGCTACTTGGGATGACTCCCACCTCACCCCCTCCTTCTACGACAACAAATGCCCGCATCTGCAGAAAGTG
GTGTCTAGCAAGGTGGAGGCCGGAAGGCGGCGTGACCAGCGATTGCCAGCTTCCGTTCTGCGACTCCACTTCCATGATTGCTTTGTCAAC
GGGTGTGATGGATCCATCTTGCTCGACGAC
AGACCAGGCTTCGTAGGGGAGAAAAGTGCCGCCCCGAACTTGAACTCGGCGAGAGGGTTCGAATTGATCGACGATATCAAGCAAGATGTGGAGGCTTTGTGTCCCGACACAGTCTCCTGT
GCTGACATATTGACCATTGCAGCCCGGGACTCCGTTGCCTTG
AGTGGTGGCCCGTATTGGGAAGTACAGCTTGGCCGGAGAGACAGTCTGACAGCCAGCAAGACCGATGCGGAAAATTCC
ATCCCCCAGCCGACCTTCACCGTTACTCAGCTTGTTGCTAGTTTCAACGCTGTTGGGCTCAATGAAAAAGACGTCGTTGCACTCTCAG
GTTCGCATTCGTTTGGCAAGGCAAGGTGTACT
AGCTTCCAGAATCGTCTCGGAAACCAAGCTAGTGGTTCGCAGTCTCCAGGCTCAGATCCATTTCTGGAGAGCAGTTACCTTGCGAAGCTGCAGACTCTGTGTCCGTCGAATGGAGACGGG
AACACTACAGTCAATCTAGACCACTTCACTCCAGTCCATTTCGACAACCAGTATTACAAGAATCTGCAAGCTGCGAAGGGGCTGCTCAACTCAGACGCCGTGTTGCATACCACCAACGGC
CAGAGCAACCAGCTTGTGGAAATTTATGCAAATGATGAACGCGTTTTCTTCAAGGACTTTGCCCAATCTGTGCTCAAGATGGGGTCGATTAAGGTGATGACTGGAAACAAGGGCGAGGTG
CGTCGCAACTGCCGGTTACCGAATACTATTCGCGCTTGA

Retrieve as FASTA