View Redoxidase 6390

Entry information : LbraAPx-CcP

Entry ID	6390
Creation	2008-10-17 (Marcel Zamocky)
Last sequence changes	2012-05-24 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-24 (Christophe Dunand)

Peroxidase information: LbraAPx-CcP

Name

LbraAPx-CcP

Class

Hybrid Ascorbate-Cytochrome C peroxidase [Orthogroup: APx-CcP001]

Taxonomy

Eukaryota Trypanosomatidae Leishmania

Organism

Leishmania braziliensis [TaxId: 5660 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LbraAPx-CcP start..stop	S start..stop
LinfAPx-CcP	554	0	1..302	1..300
LdonAPx-CcP01	554	0	1..302	1..300
LmexAPx-CcP01	547	0	1..302	1..300
LmAPx-CcP	541	0	1..304	1..302

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6390' 'join(48874..49791)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	48874..49791	916
join(48874..49791)

Literature and cross-references LbraAPx-CcP

Literature	Peacock C.S., Seeger K., Harris D., Murphy L., Ruiz J.C., Quail M.A., Peters N., Adlem E., Tivey A., Aslett M., Kerhornou A., Ivens A., Fraser A., Rajandream M.A., Carver T., Norbertczak H., Chillingworth T., Hance Z., Jagels K., , Berriman M. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Nat. Genet. 39:839-847(2007).
Protein ref.	GenBank: XP_001564302 UniProtKB: A4HAD2
DNA ref.	GenBank: FR798994.1 (48874..49791)

Protein sequence: LbraAPx-CcP

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	305 (522)
PWM (Da):	33733.69 (55942.3)	Transmb domain:	i12-34o
PI (pH):	7.81 (4.51)	Peptide Signal:	cut: 18 range:18-539

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MTGTSRRAKG LFAGIAAGSF VSGAMIVSCA SFGSRANEPP FDIKSLRSDI EAMISDNLDL GPSLVRLAWH EAGSYDCFKK DGAPNSASMR FKPECQYEGN NGLEVPRRAL EPFKKKYPQI SYADLWVLAA YVAIEYMGGP SIPFSWGRVD AKDGSVCGPD GRLPDGGKTQ DHVREVFTRL GFNDQETVAL IGAHTCGECH LKYSGFDGPW THDKNGFDNS FFTQLLSEEW VVNPKIQKMQ
LMDRATTKLM MLPSDMSLIL DPKYRKYVEL YANDNDRFNK DFSAAFKKLT ELGTKNLRKA PAVEC

Retrieve as FASTA

Remarks

Complete sequence from genomic (Chromo 20, no intron). Strain="MHOM/BR/75/M2904".

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGACCGGTA CCTCGCGGCG AGCGAAGGGG CTCTTTGCTG GCATCGCTGC CGGCTCCTTC GTGAGCGGTG CCATGATTGT TTCGTGTGCC AGCTTCGGCT CTCGGGCGAA TGAGCCGCCG TTTGATATCA AGTCACTCCG TTCCGACATT GAGGCGATGA TTTCTGATAA TCTCGATCTT GGACCTTCGC TGGTTCGTCT CGCGTGGCAC GAGGCTGGCT CTTACGACTG CTTTAAGAAG GACGGCGCTC CGAACTCGGC GTCGATGCGC TTCAAACCAG AGTGCCAATA CGAGGGTAAC AACGGTCTCG AAGTCCCTCG CAGGGCGCTG GAGCCGTTCA AGAAAAAGTA TCCGCAAATA TCTTATGCAG ATTTGTGGGT GCTTGCCGCC TACGTGGCTA TTGAGTACAT GGGTGGTCCG AGTATTCCGT TCAGCTGGGG TCGCGTGGAT GCGAAGGACG GCTCTGTGTG CGGACCGGAC GGGCGCCTGC CGGACGGTGG AAAGACGCAG GATCACGTGC GCGAGGTCTT CACGCGTCTC GGGTTCAATG ATCAGGAGAC GGTGGCGCTT ATCGGTGCGC ACACTTGCGG TGAGTGCCAC CTCAAGTACT CCGGCTTCGA TGGGCCGTGG ACACACGACA AGAACGGGTT CGACAACTCC TTCTTCACGC AACTTCTCAG TGAGGAGTGG GTGGTGAATC CCAAGATCCA GAAGATGCAG CTGATGGACC GCGCGACTAC GAAACTGATG ATGCTTCCCA GTGACATGTC CCTGATTCTC GACCCCAAGT ACCGCAAGTA CGTTGAGCTA TACGCAAACG ACAACGACCG CTTCAACAAA
GATTTTTCCG CGGCGTTCAA GAAGTTGACG GAGCTGGGCA CCAAAAACCT TCGCAAAGCA CCGGCAGTGG AATGCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA