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Entry information : Ppa2CysPrx01
Entry ID 6395
Creation 2008-10-30 (Christophe Dunand)
Last sequence changes 2011-02-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-02-02 (Christophe Dunand)
Peroxidase information: Ppa2CysPrx01
Name Ppa2CysPrx01
Class Typical 2-Cysteine peroxiredoxin    [Orthogroup: 2CysPrx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Ppa2CysPrx01
start..stop		 S start..stop
Ppa2CysPrx02 431 1.69e-154 36..282 36..282
Mpal2CysPrx01 411 1.29e-146 1..282 1..275
Mp2CysPrx01 402 4.17e-143 38..282 34..275
Gb2CysPrx 393 1.49e-139 1..282 1..279
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6395' 'join(2368256..2368501,2368812..2368895,2369312..2369393,2369648..2369727,2369946..2370071,2370306..2370419,2370772..2370888)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2368256..2368501 244 N° 2 2368812..2368895 82 N° 3 2369312..2369393 80 N° 4 2369648..2369727 78
N° 5 2369946..2370071 124 N° 6 2370306..2370419 112 N° 7 2370772..2370888 115  
join(2368256..2368501,2368812..2368895,2369312..2369393,2369648..2369727,2369946 ..2370071,2370306..2370419,2370772..2370888)


exon

Literature and cross-references Ppa2CysPrx01
Literature Hasebe,M., Nishiyama,T., Suzuki,Y., Sugano,S., Hiwatashi,Y., Kohara ,Y. and Shin-i,T. Expressed genes in Physcomitrella patens. Unpublished (2008).
DNA ref. Phytozome 12:   scaffold_30 (2368256..2370888)
EST ref. GenBank:   DC936445 [5' end]  DC957738 [3' end]
Cluster/Prediction ref. UniGene:   Ppa.5529
Protein sequence: Ppa2CysPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   282
PWM (Da):   %s   30066.48 Transmb domain:   %s   o269-287i347-369o406-428i449-471o481-500i642-659o679-698i
PI (pH):   %s   7.5
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MACAAAASGVTLPAGNIAHARPAAFSSSASGASSSLSVRKSFSGLSKSFAARLAATNAPTGKAASAAGVKIASQKRGVITASAQDSYEPLIGNVAPDFEAEAVFDQEFIKVKLSEYIGKK
YVVLFFYPLDFTFVCPTEITAFSDRYSEFEKLSTEVIGVSTDSFSHLAWIQTDRKAGGLGDLHYPIVSDITKKISRSFNVLIPEQGIALRGLFIIDKQGVIQHATVNNLGIGRSVDETLR
TLQAVQYVQDNPDEVCPAGWKPGEKTMKPDSKLSKEYFEAI*

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns) and 18 ESTs (unigene) and 28 not compiled. Strain="Gransden"
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTGTGCTGCAGCAGCCTCCGGCGTCACGCTCCCCGCGGGCAACATCGCCCATGCTCGCCCTGCGGCCTTTTCGTCCTCTGCCTCCGGCGCATCCTCCTCTTTGTCCGTGCGGAAG
TCGTTCTCCGGACTGAGCAAAAGCTTTGCTGCTCGCCTGGCTGCTACCAATGCACCCACTGGCAAGGCTGCTTCGGCAGCTGGAGTCAAGATCGCGTCGCAGAAGCGGGGTGTGATCACT
GCTTCGCGGTGAGTGAGATGAGCGAAATTAAGGAGATGGAATGAATAGCGTTAGGCGTTAGGTCAAACTCCTGACAGCAACTTCTTAGCCCAAAATGTGGGTGACTCTTTCGTTGTGGGT
GTTGATGTGTCCTATGGCGATTACTATCCGGGGCTCAGGGTCTACGGATTAATAGATGCTACGTGATGCATGTCGTGAATTCTCCGCCCTTCCGTGTCGCGATTATGTGGATGGTTGCTG
GAGATCATCGAAGGGTGGGCGGAATAGGGGAGGAGCGTTGTGTGGAGGTAATAACTGGTTTGTGGAGTGTCCATGCAGGCGCAGGACAGCTACGAGCCACTCATTGGTAATGTTGCCCCA
GACTTCGAGGCGGAGGCTGTGTTCGACCAGGAATTTATTAAGAGGCATGTTTCAACCGTTCAGTTTTCCGATCACGGTTCTGGTTGTTGCCGAGTCTCGTGCCTCCCATATGTGCGATTC
TGTATTCTATTAGAGTATGAAATAGCCATTTCAAGTACTATCCCATTCCTCCAATTTTGTTTTTTACAGTGTCTGTCTCATGGGGCATCTGAGTGAATTTCTGGTCATGTGCGGCTTCGG
GAGCAACCTTGCTTGTGCAAAGTTTACATTCTATGCCTTCCTAGTTCACACAGCAACTAGTTTCAGCTCGGGGAGCGATTTCGCTTGTACAAGGTATTAGTCATGTCATGTTGTATGTGG
CATGGGAGATCGTGGGAGTAGCTAATTCGGGGAGGTATGTATACAATCATCAATATTACGTTTGTGGATGGACTGACCGATCGGTTTTGCCTACATGCAGGTTAAGCTGTCCGAGTACAT
TGGAAAGAAGTACGTCGTATTGTTCTTCTACCCTTTGGACTTCACATTCGTATGTCCAACAGAGGTACTCATCGGGTTTTGGATGCCCTTCCTGTCCTGTTCTGTTCAGAGGAGGGGTTA
GTCTTCTTTGCATTAGTGGGGAACATTGGGCAGAGGTGAGCAAGGGGCTGTACAGGGGAGTAGTTTTCCAGTGTTTTTATTTATAGCTCCAACTTTCAAGTCATTGAGATAATTGCGTTT
TCGACGGTAGTGACACACTTCCGGTGTGAATGCTAAGTGATTTGTGAGCTAGATTTAGGCCATAACGTGAGCTTGCAGAAATCACTGCCTTCAGTGACAGGTACAGCGAATTCGAGAAGC
TAAGCACGGAAGTTATCGGTGTTTCCACTGACAGCGTGTGGTATGAATTCATCCTATTTCATCTCAATTGTGTGTCGTGATGTGATGTAGCGGGGGTGAGGGGAACGGTGAGGTGCATGG
ATGTTGAGGCGAGATGTGGATCAGAATTGTTTGGATGCGGCTTGTCCTCTGAGATAAGGAATGGACGTAGTGCAGTTTTTGGCTGGTTCCCAGTTGGAGCAGACCCAACTAAGCATGTGA
CCTTGGCAATGGCTGCAGTTCTCTCACCTCGCCTGGATCCAAACTGATAGAAAGGCAGGAGGGCTCGGGGACCTGCATTATCCCATCGTCTCGGACATTACCAAAAAGATTTCTAGGTCA
TTTAATGTACTGATTCCGGAGCAGAGGTATTAAAGAGAGTAATAATGGCTTGTTGACTTTGAAGTTTGTTTGCAGTGGAAAATGTTCGTTTTTTTTATTATGTCTTTATTTACTTTGATC
AAAACAGTATATTATAATACTATTCTATTTGGGTTTTTTTTTGTTTGAAGGGGAGAGAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATCCGGTGGGTGTTCCCCGACTGA
GTTGGGATTTATTTTGGCAGGGCATCGCACTGAGGGGTCTATTCATCATTGACAAACAGGGAGTGATCCAGCACGCAACCGTCAACAACCTTGGTATTGGGCGAAGCGTTGACGAAACTC
TGCGGACTCTGCAGAGGTAGGTGGAAAGGGTAGTCTACTTTGGAACATGCTGAGACTGGGTTTAGAAGCAATTCCCAGTTAGCCTAATGGCACGAGTGGTTTCGGAGTGGAGCTGTTCGT
CGCTCAGCGTCTTCCCATCCTGTAGTTGACAACCTTTAGGAACACCTATAGCATTCCTGAGATTTCGTATGGTACAATCGTCCTTAGATGGAGGGTCCATCTAAGAGCCTCATATCGTAT
ACAATGAACGTGTAAAGCATTTTGGTGAGGCCGACATAGGATGTTTATCTCGATATTGCAATTGGTACTGGTAGGGCTAATTTTTCTGTTTGTGAGCGTGTGGCTGAAGCTGCTATTTTT
GTTCTCAGGCCGTACAGTACGTGCAAGATAACCCAGACGAGGTGTGCCCTGCTGGCTGGAAGCCTGGGGAAAAAACGATGAAGCCTGACTCGAAGCTAAGCAAGGAGTATTTCGAGGCCA
TCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGTGTGCTGCAGCAGCCTCCGGCGTCACGCTCCCCGCGGGCAACATCGCCCATGCTCGCCCTGCGGCCTTTTCGTCCTCTGCCTCCGGCGCATCCTCCTCTTTGTCCGTGCGGAAG
TCGTTCTCCGGACTGAGCAAAAGCTTTGCTGCTCGCCTGGCTGCTACCAATGCACCCACTGGCAAGGCTGCTTCGGCAGCTGGAGTCAAGATCGCGTCGCAGAAGCGGGGTGTGATCACT
GCTTCGGCGCAGGACAGCTACGAGCCACTCATTGGTAATGTTGCCCCAGACTTCGAGGCGGAGGCTGTGTTCGACCAGGAATTTATTAAGGTTAAGCTGTCCGAGTACATTGGAAAGAAG
TACGTCGTATTGTTCTTCTACCCTTTGGACTTCACATTCGTATGTCCAACAGAAATCACTGCCTTCAGTGACAGGTACAGCGAATTCGAGAAGCTAAGCACGGAAGTTATCGGTGTTTCC
ACTGACAGCGTGTTCTCTCACCTCGCCTGGATCCAAACTGATAGAAAGGCAGGAGGGCTCGGGGACCTGCATTATCCCATCGTCTCGGACATTACCAAAAAGATTTCTAGGTCATTTAAT
GTACTGATTCCGGAGCAGGGCATCGCACTGAGGGGTCTATTCATCATTGACAAACAGGGAGTGATCCAGCACGCAACCGTCAACAACCTTGGTATTGGGCGAAGCGTTGACGAAACTCTG
CGGACTCTGCAGGCCGTACAGTACGTGCAAGATAACCCAGACGAGGTGTGCCCTGCTGGCTGGAAGCCTGGGGAAAAAACGATGAAGCCTGACTCGAAGCTAAGCAAGGAGTATTTCGAG
GCCATCTGA

Retrieve as FASTA