Entry information : PtroKat01
Entry ID 6419
Creation 2008-12-12 (Christophe Dunand)
Last sequence changes 2010-10-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-02-21 (Christophe Dunand)
Peroxidase information: PtroKat01
Name PtroKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pan
Organism Pan troglodytes (chimpanzee)    [TaxId: 9598 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtroKat01
start..stop
S start..stop
GgoKat 1100 0 1..527 1..527
HsKat01 1096 0 1..527 1..527
PabeKat01 1084 0 1..527 1..527
MnemKat01 1078 0 1..527 1..527
Gene structure Fichier Exons


exon

Literature and cross-references PtroKat01
Literature Chimpanzee Sequencing and Analysis Consortium. Initial sequence of the chimpanzee genome and comparison with the human genome. Nature 437 (7055), 69-87 (2005).
DNA ref. GenBank:   NC_006478.2 (34708808..34741643)
mRNA ref. GenBank:   XM_001147928.1
Protein sequence: PtroKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   527
PWM (Da):   %s   59541.62 Transmb domain:   %s   i7-24o
PI (pH):   %s   7.38
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MADSRDPASDQMQHWKEQRAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGES
GSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPI
FPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQG
IKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTK
VWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDT
HRHRLGPNYLHIPVNCPYRARVANYQRDGPMCMQDNQ
GGAPNYYPNSFGAPEQQPSALEHSIQYCGEVRRFNTANDDNVTVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNF
TEVHPDYGSRIQALLDKYNAEKPK
NAIHTFVQSGSHLAAGEKANL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 11, 12 introns). No EST. Isolate="Yerkes chimp pedigree #C0471 (Clint)".
DNA
Send to BLAST
CDS
Send to BLAST
cDNA
Send to BLAST