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Entry information : Pabe1CysPrx[P]03
Entry ID 6424
Creation 2009-01-31 (Christophe Dunand)
Last sequence changes 2009-01-31 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-08-12 (Christophe Dunand)
Peroxidase information: Pabe1CysPrx[P]03
Name Pabe1CysPrx[P]03
Class 1-Cysteine peroxiredoxin     [Orthogroup: 1CysPrx001]*
Taxonomy Eukaryota Metazoa Chordata Mammalia Hominidae Pongo
Organism Pongo abelii (Sumatran orangutan)    [TaxId: 9601 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value Pabe1CysPrx[P]03
start..stop		 S start..stop
Ptro1CysPrx[P]03 345 1.7e-123 8..190 1..183
Hs1CysPrx[P]03 325 1.3e-115 2..190 4..192
Mmul1CysPrx[P]03 262 5.47e-91 20..190 1..177
Mfa1CysPrx 247 2.4e-84 1..183 4..189
Literature and cross-references Pabe1CysPrx[P]03
Literature Wilson,R.K. and Mardis,E. A 6x draft sequence assembly of the Pongo pygmaeus abelii genome.
DNA ref. GenBank:   ABGA01028473.1 (14700..15369)
Protein sequence: Pabe1CysPrx[P]03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   189 (339)
PWM (Da):   %s   20198.78 (35872.7) Transmb domain:   %s   o264-286i
PI (pH):   %s   4.56 (4.44) Peptide Signal:   %s   cut: 23 range:23-361
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GLLLGDKAPN SEANRTVGCI CSHDFLGDSC GILFSHPRDS TPVCTMELGR AAKLAPEFTK SNVKLTALAT DSAEDHLAWS KNNNAYNSDE PTEKCPFTNI DGKDQDLAVL LGMLDPPEME 
EKGMAVRACG VYFCS*QETE AVYPATTGRN LDEIRGVVIS LQLTAEERVA TLIDKKNGNS YVAGHGGSWL 

Retrieve as FASTA  
Remarks Pseudogene (chromo 12). Stop codon in frame, ATG is missing and short 3' are missing. No EST.