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Entry information : MtAPx04 (Medtr5g064610.1[4.0] / Medtr5g073820.1[3.0])
Entry ID 6447
Creation 2008-12-31 (Christophe Dunand)
Last sequence changes 2008-12-31 (Christophe Dunand)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-07-31 (Messaoudi)
Peroxidase information: MtAPx04 (Medtr5g064610.1[4.0] / Medtr5g073820.1[3.0])
Name (synonym) MtAPx04 (Medtr5g064610.1[4.0] / Medtr5g073820.1[3.0])
Class Ascorbate peroxidase    [Orthogroup: APx2004]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Leaves
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtAPx04
start..stop		 S start..stop
GmAPx13 554 0 1..353 1..347
GmAPx14 538 0 1..353 1..340
VvAPx07 537 0 1..353 1..344
PpeAPx05 535 0 1..353 1..349
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6447' 'complement(join(27142481..27142591,27142706..27142840,27143386..27143523,27144116..27144222,27144570..27144700,27145058..27145098,27145189..27145254,27145374..27145408,27145507..27145591,27145917..27146027,27146341..27146442))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 27146341..27146442 100 N° 2 27145917..27146027 109 N° 3 27145507..27145591 83 N° 4 27145374..27145408 33
N° 5 27145189..27145254 64 N° 6 27145058..27145098 39 N° 7 27144570..27144700 129 N° 8 27144116..27144222 105
N° 9 27143386..27143523 136 N° 10 27142706..27142840 133 N° 11 27142481..27142591 109  
complement(join(27142481..27142591,27142706..27142840,27143386..27143523,2714411 6..27144222,27144570..27144700,27145058..27145098,27145189..27145254,27145374..2 7145408,27145507..27145591,27145917..27146027,27146341..27146442))


exon

Literature and cross-references MtAPx04 (Medtr5g064610.1[4.0] / Medtr5g073820.1[3.0])
DNA ref. Phytozome 12:   chr5 (27146442..27142481)
EST ref. GenBank:   EV256194.1 [5' end]  BQ157931 [Fragment]
Cluster/Prediction ref. Phytozome Gene 12:   31086240 UniGene:   Mtr.8490
Protein sequence: MtAPx04 (Medtr5g064610.1[4.0] / Medtr5g073820.1[3.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353
PWM (Da):   %s   38765.82  
PI (pH):   %s   7.93
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGVSFLSISTLPSLHPLGGSHYPKTTSTRHQPRSVSICCAKIKTDVSDEEEQFFHWRRRDVLKCIGLTIGLESISSSGSLLGTANAADLIERRQRSDFQSQIKGTLYTAIANPDLTPSIL
TLALNDALTYDKATKTGGPNGSIRFSSEISRPENKGLSAALNFIEEAKKEIDSYSKGGPISYADLIQYAQSATKAQFLASAIRKCGGNEEKGNLLYTAYGSNGQWGLFDRQFGRTDTDEA
DPEGRIPLWEKASVQEMKDKFSAVGFGPRLAVLSAFIGPDQDATETLLASDPDVAPWVQKYQRSRETVSRTDYEVDLITTFTKLSTLGQKINYEAYTYPRKKIDITKLKL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 10 introns) and 16 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGTCTCTTTCCTCTCAATCTCAACTCTTCCTTCTCTTCATCCACTTGGTGGTTCTCATTATCCAAAAACAACTTCAACCAGACACCAACCTCGTTCAGTAAGTCTTTGTTACATA
CATTACAATGTCCTTTCTTAGATGTACATATTATGTGAATTCTGAATGATGATAATATGTTTTGGAACTTTGCATTAAAAAAAATAGATAAAGTCAATGTATGTTTGGATTGACAGTTAG
TTTGATAGAATCATGATTTGATCATAAGTTATACTTTGGAGCTTTAACAAAATCATGGTGTCACTGTGATTTCATCAAGCTCAATGGTTCCAAGCATTCACTCAATCATATTGGTTGCAA
TTGTTGCTTAGTTATGAATAATTTGAATTTGAAATAACATTGGTTTTGTTTTTAGGTGTGTCCATTTGTTGTGCAAAAATCAAGACTGATGTTAGCGATGAAGAAGAACAGTTCTTCCAT
TGGAGGCGAAGAGACGTTCTTAAATGCATTGGGTTGACCATTGGTTTGGTAAGAGTCATTATTTTGAATTGTTGGTAACAAATGTATTTCTTGTAAGGTTGATCAACGTCTTTACTAGTT
CTTTTTATTTTTATTTCCTTATAAAATGTAAATTTAGTGTTGTTTGAGTTTGGTAAAAGACCTCTTATGCTGAGAAATCATCACAAAGTAGTGCAGGTAGGAAACTTTGGGATAAAACAA
TGCACACCATCATATTTTCATCTTGATCAACCAAAAATTTGAGCTGAAATATTTTATATATTATTATTGGATATGTATTTAGTGGATAAGATTGATTTGATGATGAGTTTCGGTCAGTTG
CATCTGTTTGTAGGAGAGTCGATATCAAGCTCTGGATCGCTCCTTGGAACCGCTAATGCTGCTGATCTAATAGAACGCAGACAGCGCTCTGATTTTCAGTGTAAGATTCTTAGGTTTTAC
AACTCCATGTGATCATTAATCATGTCAAACTCAATGGTTCTTTCATTTTAGCAGAGTTCTAACTTTCTGTTCTTACAGCTCTCAAATTAAAGGGACGCTATATACAGCAATAAAGGTATA
GTTTGCTGACTTGCATTTACTGAATGGTTATGGATTATACATTTGTCTTTTCCAGCTAGAGAATAGAATTTCCAATTTGGATATGAGCTTATTCGACGTTTGATATCTCTTCAGGCGCAA
ATCCTGATCTTACTCCATCCATTCTAACACTGGCTCTAAATGATGCTTTGACTTATGATAAGGTGAGAGACGCGCGCTCGCACCCACATACATGCATGAACAGATATATCTATATTTCAT
CTGTATTGATTGGAATCTTCTTAAGTTTGTAGGCGCAACGAAAACGGGTGGCCCAAATGGTTCTATCCGGTTCAGGTACTTTTTTTTTTTGTAATTAACATTCAAATCCAATGATGTTAA
CATATGTATAAGTATAACCATAGATGTAGTCTTTAATTCTTTTTAGAAACAGTTAGTCTTCTAAATAAGGTACTCTAAGATTGTTATTGCATTGAAAGTTGTCTTTTTTATGCCCCTCTC
TATAGGCCATAGGTGATAGTACAAAGTAATAAAATTTTGAAGTTTTACTTGTCAGTATATCTTAAATTTCTGATTTTACTTGCAATTTCTTCAGAAATGAAAATTTTTCCTCTTTCTTTG
CTTGTATGCATTATTTTTGCTTACCAATAATCATAATACTTTTTCTGTTTTTTTTAATAATTCTGTGTGAAGCTCTCAGAAATAAGTAGACCTGAAAACAAGGGGCTTTCTGCAGCCTTG
AATTTTATAGAGGAAGCAAAAAAAGAGATAGATTCATATTCCAAAGGTGGACCTATTTCCTATGCAGATCTCATCCAGTATGCAGGTTGAACATTTCATCCCCGTTTTGAAACATAATAC
TTATTACCTATGAAGCACAGACACATATAATTACACTAAATTATGTGATTTCCTCAAATTATTAGCGGTGTCGGCGTGTCAGTGTCTGTGTCCACGATTCATAGCTTATTAGCAGTATAT
GTTTCACATGCATATTCTAAATATCTGTTGATTATTGTGAGCATTTTCTACAATACATGTTTCACATACTTGTTCTAAATGTCTGTTGATTATTGTGACGATTTTTTGTTAAATCAATTT
TGATTAAGAATTTGCTAGAAGTTGTAGGGATATATTCAAATTCCATTGACTTTATTGTCTTCATTTTTGTAGCACACAAAGTGCAACAAAGGCTCAATTTTTAGCTTCTGCAATTCGCAA
ATGCGGTGGAAATGAGGAGAAAGGGAATTTACTATACACTGCATATGGATCAAATGGACAGGTTTTCTTTTGAACTTAAGCTCTTATCCAAAATCTGGTTAATACTAGCTCTGTCTCTAA
TTATAAGCCCCGTTTATATAAAAATCGCTAAATATAAACCTCATTTTAATTAGTAGAGTAGATAGATTAATTATTATTTTTCAAAATATATCCCTTATTTATACTACGAATTTGTCTTAG
AAGATGAAAAGTCCAAATTTAACACATCTTTACACAATAGGATATTTTAGTAACATCTATATACAAAATGAATACATTAAATGCTATCTAACATCTATATTTTAGTAACATCTATATACA
AAATGAATTCTAGATCAATGTCAGTTTGATCTATTATGCTTTAGTTATTTTCAAACTTTAGTAAGTGTACATTGGTAAGATTTATCTTATTATCAGCACAATCTGCACCTCTTCAAGTGA
AAAATGGATAAAGATGTGTTGTGTTGATTTATCAATAATTACACAGAATAATGTCCTACAAAAACTTTATGAAATGATCCATGGTTGGAAATGTTCACAAGATGTTGCTAAATAACCCTT
CACTAACACGAATACACGATCATGGAACACATCCAATTTTCGTTTTGGATCAGTGTGGGGTTTGTTCGATAGGCAATTTGGTAGGACTGATACTGACGAGGCAGATCCAGAGGGGAGAAT
TCCACTTTGGGAGAAAGCAAGTGTTCAGGAAATGAAAGATAAATTTTCTGCAGTAGGCTTTGGTCCTCGCCAGGTACTTCCCATATTTTATCACTATTTTTGCTCATTCTTGTCGATCGC
TGATGCGCAAAATATAGTGTGTTTGTTGACACTATAGAGCGCCACAATAACGGCTATTTGACAACATTGTACTAAATAGCGGATCATGACACAATAGTGATTGTTCAAATTTTGCTATGC
TATCACGCTATATAACAACCCTGATCTTTCTTATAGAAATTTTGAAAGGCATATATAAGATGCCACCTGTATATAGAAGAGAAATTGCAATCTTGGTATATATGCTACAAAGTTCAACTT
AGACTGACATAAGCATTTTCCCCTCTCCAGTGTCGCTATAAAATGATTAAAGCTATTCCATCTAAGAAACTATTCCCTACATTCCATTTAATGTTTTTTAGCGAAATGGTCTTGTCCGAA
CTCAGTTATCATTTTACAATTTCAGTTGAACAAATTGTTATTGTTTTGCGATATACTGTTTTGTACAAACCTCAATTTTCTGCGATCCACGATTGACAACATTGAATGTTACTAATTATG
TTCTGTCTATTTGGGTAGCTCTGGCTGTGTTGTCTGCATTCATAGGTCCTGATCAGGATGCAACAGAAACCTTATTGGCATCTGATCCAGATGTTGCTCCATGGGTACAAAAATACCAAC
GGAGCCGCGAAACTGTCTCTCGAACCGACTACGAGGTAAGTTTAACTATGAATCCCTCTCTATGCAAGAGAAGCAAAGCAGTTACTGAAACTTTCGTTTGGTTAAAAAAATTCACTTGGT
AATTCTCTTTGGTTTGTTATCTTTCTCAGGTGTTGATCTGATAACCACTTTCACAAAATTGAGTACCTTGGGACAAAAAATTAACTATGAGGCATATACATATCCTCGCAAGAAGATCGA
CATTACCAAACTCAAGTTGTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGTGTCTCTTTCCTCTCAATCTCAACTCTTCCTTCTCTTCATCCACTTGGTGGTTCTCATTATCCAAAAACAACTTCAACCAGACACCAACCTCGTTCAGTGTCCATTTGTTGTGCA
AAAATCAAGACTGATGTTAGCGATGAAGAAGAACAGTTCTTCCATTGGAGGCGAAGAGACGTTCTTAAATGCATTGGGTTGACCATTGGTTTGGAGTCGATATCAAGCTCTGGATCGCTC
CTTGGAACCGCTAATGCTGCTGATCTAATAGAACGCAGACAGCGCTCTGATTTTCAGTCTCAAATTAAAGGGACGCTATATACAGCAATAAAGGCAAATCCTGATCTTACTCCATCCATT
CTAACACTGGCTCTAAATGATGCTTTGACTTATGATAAGGCAACGAAAACGGGTGGCCCAAATGGTTCTATCCGGTTCAGCTCAGAAATAAGTAGACCTGAAAACAAGGGGCTTTCTGCA
GCCTTGAATTTTATAGAGGAAGCAAAAAAAGAGATAGATTCATATTCCAAAGGTGGACCTATTTCCTATGCAGATCTCATCCAGTATGCAGCACAAAGTGCAACAAAGGCTCAATTTTTA
GCTTCTGCAATTCGCAAATGCGGTGGAAATGAGGAGAAAGGGAATTTACTATACACTGCATATGGATCAAATGGACAGTGGGGTTTGTTCGATAGGCAATTTGGTAGGACTGATACTGAC
GAGGCAGATCCAGAGGGGAGAATTCCACTTTGGGAGAAAGCAAGTGTTCAGGAAATGAAAGATAAATTTTCTGCAGTAGGCTTTGGTCCTCGCCAGCTGGCTGTGTTGTCTGCATTCATA
GGTCCTGATCAGGATGCAACAGAAACCTTATTGGCATCTGATCCAGATGTTGCTCCATGGGTACAAAAATACCAACGGAGCCGCGAAACTGTCTCTCGAACCGACTACGAGGTTGATCTG
ATAACCACTTTCACAAAATTGAGTACCTTGGGACAAAAAATTAACTATGAGGCATATACATATCCTCGCAAGAAGATCGACATTACCAAACTCAAGTTGTAA

Retrieve as FASTA