1. Browse the Database
  2. View Redoxidase
Entry information : SofPrx13
Entry ID 6468
Creation 2009-01-28 (Christophe Dunand)
Last sequence changes 2009-01-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2009-01-28 (Christophe Dunand)
Peroxidase information: SofPrx13
Name SofPrx13
Class Class III peroxidase    [Orthogroup: Prx094]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Saccharum
Organism Saccharum officinarum (sugarcane)    [TaxId: 4547 ]
Cellular localisation N/D
Tissue types Root tips
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SofPrx13
start..stop		 S start..stop
ZmPrx107 586 0 1..343 1..339
SbPrx58 582 0 1..343 1..339
ZmPrx44 575 0 1..343 1..339
SbPrx59 559 0 1..343 1..340
Literature and cross-references SofPrx13
Literature Vettore,A.L., da Silva,F.R., Kemper,E.L. and Arruda,P. The libraries that made SUCEST. Genet. Mol. Biol. 24 (1-4), 1-7 (2001).
EST ref. GenBank:   CA141448.1 [5' end]  CA268531 [3' end]
Cluster/Prediction ref. UniGene:   Sof.826
Protein sequence: SofPrx13
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   353 (325)
PWM (Da):   %s   38581.9 (35877.4)  
PI (pH):   %s   8.22 (8.09) Peptide Signal:   %s   cut: 29 range:29-353
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKLSAAVLCA LVAVQAAVLL ATLPSAQAKE LEVGYYSKKC KGVENVVKWH VVRALKANRR TGAALVRLLF HDCFVRGCDG SVLLDASSDN PHPEKEAPVN IGLAAFDLLE EIKAAVEKRC  PGVVSCSDIL IYAARDAASV LSNGHVHFAV PAGRLDGFVS KAEEAQAELP DSTHDVQQLI DNFAKKNFTV EELVILTGAH SIGQGHCSSF TGRLSEPSSQ ITPAYRDLLN YKCSQGSDPP 
VDNNVRDEEY RVVARFTPGF TSRVRKVPDF LDNSFYHNNL AKIVNFHSDW TLLTHKGGLS GTLFEYRGQP ARFGDQELLR FPWLKLNKAS HAKPEAKGQI RKEMPRSQTP AIL 

Retrieve as FASTA  
Remarks Complete sequence from 11 ESTs, cultivar="Q117"